RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 LIX1LQ8IVB5 337 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 KLHDC8AQ8IYD2 350 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 TMEM52Q8NDY8 209 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 OR5L2Q8NGL0 311 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 GOT1L1Q8NHS2 421 aaPredicted RBP17.58■□□□□ 0.4
SCARF1-204ENST00000570902 FAM45AQ8TCE6 357 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 CCT6BQ92526 530 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 SCYL1Q96KG9 808 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 ALPK1Q96QP1 1244 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 GPATCH1Q9BRR8 931 aaKnown RBP17.58■□□□□ 0.4
SCARF1-204ENST00000570902 RASSF1Q9NS23 344 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 SNX12Q9UMY4 172 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 NAV3Q8IVL0 2385 aa17.58■□□□□ 0.4
SCARF1-204ENST00000570902 MAP1AP78559 2803 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-204ENST00000570902 ANKHD1Q8IWZ3 2542 aaKnown RBP17.57■□□□□ 0.4
SCARF1-204ENST00000570902 A0A0G2JN53 185 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 ATP6AP2A0A1C7CYW4 349 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 HCN1O60741 890 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 CTNSO60931 367 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 ATP6AP2O75787 350 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 C1GALT1C1LP0DN25 315 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 HNRNPH1P31943 449 aaKnown RBP17.57■□□□□ 0.4
SCARF1-204ENST00000570902 CDKL1Q00532 357 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 STX4Q12846 297 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 RIPPLY2Q5TAB7 128 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 TRIM40Q6P9F5 258 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 CAMKMTQ7Z624 323 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 KRT78Q8N1N4 520 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 ACTRT1Q8TDG2 376 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 ANKRD7Q92527 254 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 LRRC46Q96FV0 321 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 CERS2Q96G23 380 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 SERINC2Q96SA4 455 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 PITHD1Q9GZP4 211 aaPredicted RBP17.57■□□□□ 0.4
SCARF1-204ENST00000570902 LIME1Q9H400 295 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 EXO5Q9H790 373 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 PPANQ9NQ55 473 aaKnown RBP17.57■□□□□ 0.4
SCARF1-204ENST00000570902 VTI1BQ9UEU0 232 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 ABCA2Q9BZC7 2435 aa17.57■□□□□ 0.4
SCARF1-204ENST00000570902 DNAJC13O75165 2243 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 TRGV5A0A0B4J1U4 118 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 PROM1O43490 865 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 CLEC3AO75596 197 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 DGKQP52824 942 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 LIM2P55344 173 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 RNF4P78317 190 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 FOXO1Q12778 655 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 CYP1B1Q16678 543 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 OR2L5Q8NG80 312 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 GRK7Q8WTQ7 553 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 PTPMT1Q8WUK0 201 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-204ENST00000570902 KIAA1191Q96A73 305 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 QRFPRQ96P65 431 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 EGFL8Q99944 293 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 ALOXE3Q9BYJ1 711 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 OR8D2Q9GZM6 311 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 REXO4Q9GZR2 422 aaKnown RBP17.56■□□□□ 0.4
SCARF1-204ENST00000570902 COPS7BQ9H9Q2 264 aaPredicted RBP17.56■□□□□ 0.4
SCARF1-204ENST00000570902 DLL4Q9NR61 685 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 ALKBH4Q9NXW9 302 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 DAPP1Q9UN19 280 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 PLEKHA6Q9Y2H5 1048 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 PCDHGB3Q9Y5G1 929 aa17.56■□□□□ 0.4
SCARF1-204ENST00000570902 GOLGA6L10A0A0M3HER8 536 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 HSPB2A8KAH6 182 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 CYR61O00622 381 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 WDR47O94967 919 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 CELA3AP09093 270 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 TNNI3P19429 210 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 UQCRC1P31930 480 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 DNASE1L1P49184 302 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 PGGT1BP53609 377 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 PLA2G16P53816 162 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 MTTPP55157 894 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 GNG11P61952 73 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 TGM3Q08188 693 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 SERTAD2Q14140 314 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 SLBPQ14493 270 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCARF1-204ENST00000570902 HSPB2Q16082 182 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 TEDDM1Q5T9Z0 273 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 RNASEH2BQ5TBB1 312 aaKnown RBP17.55■□□□□ 0.4
SCARF1-204ENST00000570902 SLCO4C1Q6ZQN7 724 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 NKAPQ8N5F7 415 aaKnown RBP17.55■□□□□ 0.4
SCARF1-204ENST00000570902 C7orf57Q8NEG2 295 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 MBD6Q96DN6 1003 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 PWWP2AQ96N64 755 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 CSF3RQ99062 836 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 CAPS2Q9BXY5 557 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 NT5DC2Q9H857 520 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 TUBA8Q9NY65 449 aaPredicted RBP17.55■□□□□ 0.4
SCARF1-204ENST00000570902 CRIM1Q9NZV1 1036 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 COPS7AQ9UBW8 275 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 IKZF3Q9UKT9 509 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 ATG4BQ9Y4P1 393 aa17.55■□□□□ 0.4
SCARF1-204ENST00000570902 ANKDD1BA6NHY2 528 aa17.54■□□□□ 0.4
SCARF1-204ENST00000570902 A6NNC1 897 aa17.54■□□□□ 0.4
SCARF1-204ENST00000570902 C17orf105B2RV13 164 aa17.54■□□□□ 0.4
SCARF1-204ENST00000570902 CDC7O00311 574 aa17.54■□□□□ 0.4
SCARF1-204ENST00000570902 SYT5O00445 386 aa17.54■□□□□ 0.4
SCARF1-204ENST00000570902 CCL3P10147 92 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms