RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 DOHHQ9BU89 302 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 APOL5Q9BWW9 433 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 MRPL17Q9NRX2 175 aaKnown RBP13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 WWOXQ9NZC7 414 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 SH3BP4Q9P0V3 963 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 TRPS1Q9UHF7 1281 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 SMIM30A4D0T7 59 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 MAGEB17A8MXT2 336 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 FABP7O15540 132 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 PRAMEF11O60813 436 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 MTRF1O75570 445 aaKnown RBP13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 CPSF4O95639 269 aaKnown RBP13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 LGI1O95970 557 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 SLC2A2P11168 524 aaPredicted RBP13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 PRPS2P11908 318 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 SRCP12931 536 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 PPM1AP35813 382 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 CDH4P55283 916 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 SPIBQ01892 262 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 PLD1Q13393 1074 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 FLYWCH1Q4VC44 716 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 TRIQKQ629K1 86 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 MZT2BQ6NZ67 158 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 PLEKHM3Q6ZWE6 761 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 GPR155Q7Z3F1 870 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 DENND1CQ8IV53 801 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 BBS7Q8IWZ6 715 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 TIGD4Q8IY51 512 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 TCEAL8Q8IYN2 117 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 CFAP52Q8N1V2 620 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 GTPBP3Q969Y2 492 aaKnown RBP13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 KIAA1143Q96AT1 154 aaPredicted RBP13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 AP2M1Q96CW1 435 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 MARVELD1Q9BSK0 173 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 NTMT1Q9BV86 223 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 MAGEH1Q9H213 219 aa13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 ZFP37Q9Y6Q3 630 aaPredicted RBP13.09□□□□□ -0.31
AC040174.1-201ENST00000563003 TSPAN4O14817 238 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 PLOD3O60568 738 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 STC2O76061 302 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 IL1AP01583 271 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 HBQ1P09105 142 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 DDCP20711 480 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 EPHB3P54753 998 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 ABATP80404 500 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 TWF1Q12792 350 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 LIPKQ5VXJ0 399 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 ANKRD54Q6NXT1 300 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 HSDL2Q6YN16 418 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 DNAJB7Q7Z6W7 309 aaPredicted RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 SLC37A3Q8NCC5 494 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 TOE1Q96GM8 510 aaKnown RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 HHIPQ96QV1 700 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 POLR2J2Q9GZM3 115 aaKnown RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 SPNS1Q9H2V7 528 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 RERGLQ9H628 205 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 TXNL4BQ9NX01 149 aaKnown RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 NDUFB11Q9NX14 153 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 TMCC3Q9ULS5 477 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 SLC9A3R1O14745 358 aaPredicted RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 LYRM1O43325 122 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 TPST2O60704 377 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 HCN1O60741 890 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 PRKAR1AP10644 381 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 ICAM2P13598 275 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 LPOP22079 712 aaPredicted RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 CORO1AP31146 461 aaKnown RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 CNR2P34972 360 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 OR1E2P47887 323 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 RAB25P57735 213 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 ZXDBP98169 803 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 FOXD4Q12950 439 aaPredicted RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 CDH18Q13634 790 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 PTPRRQ15256 657 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 POU4F3Q15319 338 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 ANGPT1Q15389 498 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 HKDC1Q2TB90 917 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 PHC2Q8IXK0 858 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 CLECL1Q8IZS7 167 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 Q8N402 240 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 IL4I1Q96RQ9 567 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 KLF16Q9BXK1 252 aaPredicted RBP13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 LIN7BQ9HAP6 207 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 ZNF224Q9NZL3 707 aa13.08□□□□□ -0.32
AC040174.1-201ENST00000563003 LOC102723532A0A0G2JNH3 316 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 A8MX80 341 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 PCDH17O14917 1159 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 ORC5O43913 435 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 ENTPD6O75354 484 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 SLC43A1O75387 559 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 CLDN11O75508 207 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 HLA-DQB1P01920 261 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 KLKB1P03952 638 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 OPN1SWP03999 348 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 ACRP10323 421 aa13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 PIPP12273 146 aaPredicted RBP13.07□□□□□ -0.32
AC040174.1-201ENST00000563003 EPB42P16452 691 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms