RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 CDCP1Q9H5V8 836 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 LYRM4Q9HD34 91 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 STMN3Q9NZ72 180 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ADGRE2Q9UHX3 823 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 ZNF225Q9UK10 706 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 MRPS33Q9Y291 106 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 TSC22D4Q9Y3Q8 395 aa13.88□□□□□ -0.19
RABGGTA-211ENST00000559850 MYO18BQ8IUG5 2567 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 DYTNA2CJ06 578 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 WASHC1A8K0Z3 465 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 TCP11X1B4DZS4 312 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 TMPRSS11DO60235 418 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 GLRA3O75311 464 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 VPS4BO75351 444 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 SCELO95171 688 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 PDYNP01213 254 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 PROCP04070 461 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 IFNA16P05015 189 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 GSTA1P08263 222 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 BSGP35613 385 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 TNFSF10P50591 281 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 AP2B1P63010 937 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 IFT88Q13099 833 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 TLR1Q15399 786 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 FRG2Q64ET8 278 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 H3F3CQ6NXT2 135 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 TDRPQ86YL5 185 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 CDYL2Q8N8U2 506 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 ELP5Q8TE02 316 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 ADAMTS18Q8TE60 1221 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 THAP3Q8WTV1 239 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 ANKRD9Q96BM1 317 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 ZNF354BQ96LW1 612 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 FRG2BQ96QU4 278 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 C1QTNF3Q9BXJ4 246 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 ELOVL6Q9H5J4 265 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 DCDC2Q9UHG0 476 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 VPS4AQ9UN37 437 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 ATG4BQ9Y4P1 393 aa13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 COPG1Q9Y678 874 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-211ENST00000559850 A0A0A6YYD5 115 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 TRBV11-1A0A0K0K1C0 115 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 OR5H15A6NDH6 313 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 GLOD5A6NK44 160 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 G3V2L1 256 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 FOXE1O00358 373 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 FGF17O60258 216 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 CTNSO60931 367 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 OTCP00480 354 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 IMPDH1P20839 514 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 TSFMP43897 325 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 PRKAA2P54646 552 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 STX4Q12846 297 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 CUL3Q13618 768 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 NR6A1Q15406 480 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 MEP1AQ16819 746 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 ZNF468Q5VIY5 522 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 C16orf47Q6ZP98 133 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 GPR180Q86V85 440 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 LCA5Q86VQ0 697 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 CCNYL1Q8N7R7 359 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 ZNF321PQ8N8H1 164 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 B3GNT7Q8NFL0 401 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 GRHL3Q8TE85 626 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 HAS2Q92819 552 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 NCLNQ969V3 563 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 SIGLEC12Q96PQ1 595 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 KCNA7Q96RP8 456 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 CENPKQ9BS16 269 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 MRPL1Q9BYD6 325 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 HES7Q9BYE0 225 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 ALOXE3Q9BYJ1 711 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 LIN28AQ9H9Z2 209 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 TEKT2Q9UIF3 430 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 ZNF223Q9UK11 482 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 SPACA6W5XKT8 324 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 NBASA2RRP1 2371 aa13.86□□□□□ -0.19
RABGGTA-211ENST00000559850 A0A1W2PR48 441 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 GABRR3A8MPY1 467 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 PRKNO60260 465 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 CDH16O75309 829 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 MYL2P10916 166 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 CHN1P15882 459 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 KRT4P19013 534 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 TNNI3P19429 210 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 TPP2P29144 1249 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 HTR6P50406 440 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 TAS2R50P59544 299 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 PMP22Q01453 160 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 TNFRSF17Q02223 184 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 SRSF1Q07955 248 aaKnown RBP eCLIP13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 TUBA3CQ13748 450 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 RCN2Q14257 317 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 GGTA1PQ4G0N0 100 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 WDR93Q6P2C0 686 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 TUBA3EQ6PEY2 450 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 CYP20A1Q6UW02 462 aa13.85□□□□□ -0.19
RABGGTA-211ENST00000559850 ZYG11AQ6WRX3 759 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms