RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TUBB4AP04350 444 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 APOA4P06727 396 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 CD3EP07766 207 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 H2AFZP0C0S5 128 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 FAM228BP0C875 321 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 MSNP26038 577 aaKnown RBP6.34□□□□□ -1.39
ATXN3-236ENST00000556220 FOXN2P32314 431 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 BDKRB1P46663 353 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SLURP1P55000 103 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SORDQ00796 357 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SPARCL1Q14515 664 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 PRPSAP1Q14558 356 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 TYSND1Q2T9J0 566 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 WLSQ5T9L3 541 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 NDUFAF5Q5TEU4 345 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 ITPRIPL1Q6GPH6 555 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 HEPHL1Q6MZM0 1159 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 POMZP3Q6PJE2 187 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 H2AFVQ71UI9 128 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 PRSS41Q7RTY9 318 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 FAM109AQ8N4B1 249 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 TMEM156Q8N614 296 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 OR2M7Q8NG81 312 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 LKAAEAR1Q8TD35 194 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 MAGEC3Q8TD91 643 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SMPDL3AQ92484 453 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SYN2Q92777 582 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-236ENST00000556220 P3H4Q92791 437 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SARAFQ96BY9 339 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 DACH2Q96NX9 599 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 QKIQ96PU8 341 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATXN3-236ENST00000556220 ALS2CR12Q96Q35 445 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 TTC1Q99614 292 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 TBL1YQ9BQ87 522 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 CNPPD1Q9BV87 410 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 TSSK1BQ9BXA7 367 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 PACSIN1Q9BY11 444 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 TTTY12Q9BZ98 90 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 LANCL2Q9NS86 450 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 SPATA7Q9P0W8 599 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 ZNF629Q9UEG4 869 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-236ENST00000556220 PCYOX1Q9UHG3 505 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 LIPGQ9Y5X9 500 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 NFS1Q9Y697 457 aa6.34□□□□□ -1.39
ATXN3-236ENST00000556220 CCDC162PA2VCL2 907 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 MBD3L4A6NDZ8 208 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 MROH6A6NGR9 719 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 MBD3L5A6NJ08 208 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 HAT1O14929 419 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 SLC16A5O15375 505 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 HCN1O60741 890 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 ITGA10O75578 1167 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 CCNDBP1O95273 360 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 SERPING1P05155 500 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 ERGP11308 486 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 IFNGR1P15260 489 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 EZRP15311 586 aaKnown RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 TPH1P17752 444 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 IL1RNP18510 177 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 PSMB4P28070 264 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 RBL1P28749 1068 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 CEACAM8P31997 349 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 RPA3P35244 121 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 CDKN2BP42772 138 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 MAN2A2P49641 1150 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 MEF2AQ02078 507 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 KRTAP1-1Q07627 177 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 SLC10A1Q14973 349 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 KCTD11Q693B1 232 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 SUSD1Q6UWL2 747 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 MAATS1Q7Z4T9 603 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 LSRQ86X29 649 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 PLD3Q8IV08 490 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 TMEM251Q8N6I4 163 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 NAXEQ8NCW5 288 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 PSD4Q8NDX1 1056 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 NFAM1Q8NET5 270 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 OR9A1PQ8NGU1 263 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 GSDMBQ8TAX9 411 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 SKA2Q8WVK7 121 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 SMPDL3BQ92485 455 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 PERPQ96FX8 193 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 PEX11GQ96HA9 241 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 FOPNLQ96NB1 174 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 OR1F2PQ96R84 312 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 C10orf88Q9H8K7 445 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 IL1RL2Q9HB29 575 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 ANKHQ9HCJ1 492 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 DDX56Q9NY93 547 aaKnown RBP6.33□□□□□ -1.4
ATXN3-236ENST00000556220 KCMF1Q9P0J7 381 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 WHRNQ9P202 907 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 PCDHGB3Q9Y5G1 929 aa6.33□□□□□ -1.4
ATXN3-236ENST00000556220 HEATR5BQ9P2D3 2071 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 KCNE1BA0A087WTH5 132 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 ATP6AP2A0A1C7CYW4 349 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 SH3D21A4FU49 640 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 SAGE2PA6NJ88 616 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 A8MVJ9 347 aa6.32□□□□□ -1.4
ATXN3-236ENST00000556220 PHF1O43189 567 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-236ENST00000556220 CBFA2T2O43439 604 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms