RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MLLT10P55197 1068 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 SELENOWP63302 87 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 TUBA3CQ13748 450 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 CRB2Q5IJ48 1285 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 KBTBD8Q8NFY9 601 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 OR5D16Q8NGK9 328 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 RELTQ969Z4 430 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 TEFMQ96QE5 360 aaKnown RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 RC3H2Q9HBD1 1191 aaKnown RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 TMPRSS11EQ9UL52 423 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 POFUT2Q9Y2G5 429 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 DICER1Q9UPY3 1922 aaKnown RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 CACNA1CQ13936 2221 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 CAPN5O15484 640 aaPredicted RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 PRAMEF4O60810 478 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 PPP2R2BQ00005 443 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 LEXMQ3ZCV2 418 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 PRAMEF9Q5VWM5 478 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 BHLHB9Q6PI77 547 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 B3GNT8Q7Z7M8 397 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 FNDC8Q8TC99 324 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 TMEM19Q96HH6 336 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 LMLNQ96KR4 655 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 WDR12Q9GZL7 423 aaKnown RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 KLHL42Q9P2K6 505 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 AP3D1O14617 1153 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 PCDH17O14917 1159 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 SLC22A1O15245 554 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 H1F0P07305 194 aaKnown RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 RGS8P57771 180 aaPredicted RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 TSTQ16762 297 aaKnown RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 FAM78AQ5JUQ0 283 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 CBLL1Q75N03 491 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 TSPYL5Q86VY4 417 aaPredicted RBP14.18□□□□□ -0.14
NEK9-209ENST00000556170 CACTIN-AS1Q8N1I8 211 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 VN1R2Q8NFZ6 395 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 ECHDC3Q96DC8 303 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 EHD1Q9H4M9 534 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 SLC27A6Q9Y2P4 619 aa14.18□□□□□ -0.14
NEK9-209ENST00000556170 NRG2O14511 850 aaPredicted RBP14.17□□□□□ -0.14
NEK9-209ENST00000556170 TSPAN9O75954 239 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 OLFM2O95897 454 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 SRPRAP08240 638 aaKnown RBP14.17□□□□□ -0.14
NEK9-209ENST00000556170 RYKP34925 604 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 IL12RB1P42701 662 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 XKP51811 444 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 BTN3A2P78410 334 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 PIN1Q13526 163 aaPredicted RBP14.17□□□□□ -0.14
NEK9-209ENST00000556170 TIMM50Q3ZCQ8 353 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 KLHL12Q53G59 568 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 SMARCD3Q6STE5 483 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 S100ZQ8WXG8 99 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 TP53INP1Q96A56 240 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 DPH7Q9BTV6 452 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 ITPAQ9BY32 194 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 POLR2J2Q9GZM3 115 aaKnown RBP14.17□□□□□ -0.14
NEK9-209ENST00000556170 SNTG1Q9NSN8 517 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 GSTT2P0CG29 244 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 GSTT2BP0CG30 244 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 PORP16435 677 aaPredicted RBP14.17□□□□□ -0.14
NEK9-209ENST00000556170 ZNF691Q5VV52 312 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 WDR53Q7Z5U6 358 aaPredicted RBP14.17□□□□□ -0.14
NEK9-209ENST00000556170 OR4N5Q8IXE1 308 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 PSD4Q8NDX1 1056 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 OR52N2Q8NGI0 321 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 FAR1Q8WVX9 515 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 NCSTNQ92542 709 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 TUBA1CQ9BQE3 449 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 ABCB9Q9NP78 766 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 RNF6Q9Y252 685 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 SPACA6W5XKT8 324 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 A0A1W2PQU0 124 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 SH3PXD2BA1X283 911 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 ANHXE9PGG2 379 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 H0YIV9 168 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 AREL1O15033 823 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 KMOO15229 486 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 UGDHO60701 494 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 GPR37L1O60883 481 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 PSIP1O75475 530 aaKnown RBP14.17□□□□□ -0.14
NEK9-209ENST00000556170 HNRNPA1P09651 372 aaKnown RBP eCLIP14.17□□□□□ -0.14
NEK9-209ENST00000556170 IL18R1Q13478 541 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 C10orf53Q8N6V4 93 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 PAPD5Q8NDF8 572 aaKnown RBP14.17□□□□□ -0.14
NEK9-209ENST00000556170 C3orf14Q9HBI5 128 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 SERHLQ9NQF3 203 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 MYO16Q9Y6X6 1858 aa14.17□□□□□ -0.14
NEK9-209ENST00000556170 DLGAP1O14490 977 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 FRS3O43559 492 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 IGHA2P01877 340 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 GGTA1PQ4G0N0 100 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 SFTPA1Q8IWL2 248 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 TEX47Q8TBZ9 253 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 HERVK_113Q902F9 699 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 Q96MT0 163 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 MBOAT4Q96T53 435 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 SPATA5L1Q9BVQ7 753 aa14.16□□□□□ -0.14
NEK9-209ENST00000556170 BHLHE41Q9C0J9 482 aaPredicted RBP14.16□□□□□ -0.14
NEK9-209ENST00000556170 CAB39Q9Y376 341 aaPredicted RBP14.16□□□□□ -0.14
NEK9-209ENST00000556170 BRCA2P51587 3418 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms