RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 EPORP19235 508 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CD27P26842 260 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CTNNA1P35221 906 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 KRT2P35908 639 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CDKN1AP38936 164 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 NBL1P41271 181 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GLIPR1P48060 266 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CRIP2P52943 208 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PTENP60484 403 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TUBB4BP68371 445 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 KRT83P78385 493 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GCNT1Q02742 428 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SQLEQ14534 574 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CDO1Q16878 200 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GTDC1Q4AE62 458 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PDLIM3Q53GG5 364 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ZRANB3Q5FWF4 1079 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SPOUT1Q5T280 376 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ARHGEF16Q5VV41 709 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TXNRD3NBQ6F5E7 133 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TMEM182Q6ZP80 229 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PHLDB2Q86SQ0 1253 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PIGZQ86VD9 579 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 AMIGO1Q86WK6 493 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 KLHL7Q8IXQ5 586 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 C4orf19Q8IY42 314 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TRIM58Q8NG06 486 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 OR10Q1Q8NGQ4 319 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 OR13C3Q8NGS6 347 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 OR4C3Q8NH37 302 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SDR42E1Q8WUS8 393 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 HPSE2Q8WWQ2 592 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CORO2AQ92828 525 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 MR1Q95460 341 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ST6GALNAC6Q969X2 333 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 MRPL38Q96DV4 380 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 GIMAP5Q96F15 307 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 DYNLL2Q96FJ2 89 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PGM2Q96G03 612 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CCDC3Q9BQI4 270 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 IDI2Q9BXS1 227 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 PITPNM3Q9BZ71 974 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SHARPINQ9H0F6 387 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 MINDY3Q9H8M7 445 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 RAVER2Q9HCJ3 691 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 SCRT2Q9NQ03 307 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ARGLU1Q9NWB6 273 aaPredicted RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 DDX43Q9NXZ2 648 aaKnown RBP1.36□□□□□ -2.19
PRPF39-208ENST00000554785 DNAJB9Q9UBS3 223 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 TNNQ9UQP3 1299 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 CHKBQ9Y259 395 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 KCNK7Q9Y2U2 307 aa1.36□□□□□ -2.19
PRPF39-208ENST00000554785 ARID2Q68CP9 1835 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PTPN13Q12923 2485 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 APC2O95996 2303 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CACNA1FO60840 1977 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 COL6A6A6NMZ7 2263 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 KIAA1217Q5T5P2 1943 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 ELP1O95163 1332 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 STK36Q9NRP7 1315 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 A0A1B0GUL7 405 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 C2CD4DB7Z1M9 353 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 C19orf81C9J6K1 198 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 O00370 1275 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 KLF11O14901 512 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 EPHB6O15197 1021 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CTAGE5O15320 804 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 ZG16O60844 167 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 FCGR3BO75015 233 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 DUSP11O75319 330 aaKnown RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 TRMUO75648 421 aaKnown RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 TGDSO95455 350 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 EML2O95834 649 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 C9P02748 559 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 RLN1P04808 185 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 SERPING1P05155 500 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CD48P09326 243 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 STAG3L1P0CL83 205 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PRSS56P0CW18 603 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 GP1BBP13224 206 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 LBPP18428 481 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 MUTP22033 750 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 LHCGRP22888 699 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 DNAJB1P25685 340 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 PSMB4P28070 264 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CHRNB4P30926 498 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 TIA1P31483 386 aaKnown RBP eCLIP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 SOAT1P35610 550 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 TCF7P36402 384 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 NKX2-1P43699 371 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CDX1P47902 265 aaPredicted RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 SP4Q02446 784 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CACNG1Q06432 222 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 SULT2A1Q06520 285 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 TRAP1Q12931 704 aaKnown RBP1.35□□□□□ -2.19
PRPF39-208ENST00000554785 RBBP7Q16576 425 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 TAZQ16635 292 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 CCDC184Q52MB2 194 aa1.35□□□□□ -2.19
PRPF39-208ENST00000554785 LBHQ53QV2 105 aaPredicted RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms