RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 CNPY4Q8N129 248 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 SLC5A8Q8N695 610 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 MTFMTQ96DP5 389 aaKnown RBP13.3□□□□□ -0.28
PRKCH-207ENST00000553831 FRG2BQ96QU4 278 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 ERVK-6Q9BXR3 956 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 SLC29A3Q9BZD2 475 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRKCH-207ENST00000553831 PPCSQ9HAB8 311 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 STMN3Q9NZ72 180 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRKCH-207ENST00000553831 EMCNQ9ULC0 261 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 COPG1Q9Y678 874 aaKnown RBP13.3□□□□□ -0.28
PRKCH-207ENST00000553831 V9GYY5 206 aaPredicted RBP13.3□□□□□ -0.28
PRKCH-207ENST00000553831 SPACA6W5XKT8 324 aa13.3□□□□□ -0.28
PRKCH-207ENST00000553831 FLNBO75369 2602 aaKnown RBP13.29□□□□□ -0.28
PRKCH-207ENST00000553831 MYOCOSA0A1B0GUC4 107 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 TCP11X1B4DZS4 312 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 CTNSO60931 367 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 LDB3O75112 727 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 GLRA3O75311 464 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 EEDO75530 441 aaKnown RBP13.29□□□□□ -0.28
PRKCH-207ENST00000553831 OTCP00480 354 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 KRT15P19012 456 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 CPN2P22792 545 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 BSGP35613 385 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 HNRNPH2P55795 449 aaKnown RBP13.29□□□□□ -0.28
PRKCH-207ENST00000553831 CLCQ05315 142 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 IFT88Q13099 833 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 SLAMF1Q13291 335 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 MRPL49Q13405 166 aaKnown RBP13.29□□□□□ -0.28
PRKCH-207ENST00000553831 CUL3Q13618 768 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 TERF2Q15554 542 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 MEP1AQ16819 746 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 UNC50Q53HI1 259 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 TTC19Q6DKK2 380 aaPredicted RBP13.29□□□□□ -0.28
PRKCH-207ENST00000553831 SH2D5Q6ZV89 423 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 ZCCHC7Q8N3Z6 543 aaKnown RBP13.29□□□□□ -0.28
PRKCH-207ENST00000553831 APCDD1LQ8NCL9 501 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 B3GNT7Q8NFL0 401 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 TRPC4APQ8TEL6 797 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 BARD1Q99728 777 aaKnown RBP13.29□□□□□ -0.28
PRKCH-207ENST00000553831 CDCP1Q9H5V8 836 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 ADAP2Q9NPF8 381 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 PSD3Q9NYI0 1048 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 ZNF225Q9UK10 706 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 PPT2Q9UMR5 302 aa13.29□□□□□ -0.28
PRKCH-207ENST00000553831 ASH1LQ9NR48 2969 aaKnown RBP13.29□□□□□ -0.28
PRKCH-207ENST00000553831 A0A0A6YYD5 115 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 SYNDIG1LA6NDD5 238 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 GABRR3A8MPY1 467 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ESPNB1AK53 854 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 TMPRSS11DO60235 418 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 PRKRAO75569 313 aaKnown RBP13.28□□□□□ -0.28
PRKCH-207ENST00000553831 SUPT7LO94864 414 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 SEMA3DO95025 777 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 IFNA16P05015 189 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ARFIP1P53367 373 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 PRKAA2P54646 552 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 TNFRSF17Q02223 184 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ID2Q02363 134 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 STX4Q12846 297 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 TUBA3CQ13748 450 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 RASA2Q15283 850 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 NR6A1Q15406 480 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ELAVL1Q15717 326 aaKnown RBP13.28□□□□□ -0.28
PRKCH-207ENST00000553831 MRM1Q6IN84 353 aaKnown RBP13.28□□□□□ -0.28
PRKCH-207ENST00000553831 RPUSD3Q6P087 351 aaKnown RBP13.28□□□□□ -0.28
PRKCH-207ENST00000553831 TUBA3EQ6PEY2 450 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 GPR180Q86V85 440 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 LGI4Q8N135 537 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 OR2W6PQ8NHA6 318 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 GRHL3Q8TE85 626 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 AENQ8WTP8 325 aaKnown RBP13.28□□□□□ -0.28
PRKCH-207ENST00000553831 NCLNQ969V3 563 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 SERPINI1Q99574 410 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ALOXE3Q9BYJ1 711 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ELOVL6Q9H5J4 265 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ANKRD10Q9NXR5 420 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ABI3Q9P2A4 366 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 TRPS1Q9UHF7 1281 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 DCDC2Q9UHG0 476 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 PHF11Q9UIL8 331 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ZNF223Q9UK11 482 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-207ENST00000553831 PPIEQ9UNP9 301 aaKnown RBP13.28□□□□□ -0.28
PRKCH-207ENST00000553831 ATG4BQ9Y4P1 393 aa13.28□□□□□ -0.28
PRKCH-207ENST00000553831 USP9XQ93008 2570 aaPredicted RBP13.28□□□□□ -0.28
PRKCH-207ENST00000553831 TRBV11-1A0A0K0K1C0 115 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 BLACEA4D250 179 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 FGF17O60258 216 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 PRAMEF2O60811 474 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 CDH16O75309 829 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 OR4F21O95013 312 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 PROCP04070 461 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 IMPDH1P20839 514 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 CLCN2P51788 898 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 MLF1P58340 268 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 SRSF1Q07955 248 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRKCH-207ENST00000553831 SERTAD2Q14140 314 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 SGO1Q5FBB7 561 aa13.27□□□□□ -0.29
PRKCH-207ENST00000553831 TCHHL1Q5QJ38 904 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms