RNA–Protein interactions for RNA: ENST00000553710.1

KTN1-211, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-211ENST00000553710 SAT2Q96F10 170 aaPredicted RBP0.78□□□□□ -2.28
KTN1-211ENST00000553710 OSGEPL1Q9H4B0 414 aa0.78□□□□□ -2.28
KTN1-211ENST00000553710 MYNNQ9NPC7 610 aa0.78□□□□□ -2.28
KTN1-211ENST00000553710 KLRF1Q9NZS2 232 aa0.78□□□□□ -2.28
KTN1-211ENST00000553710 SENP1Q9P0U3 644 aa0.78□□□□□ -2.28
KTN1-211ENST00000553710 NIP7Q9Y221 180 aaKnown RBP eCLIP0.78□□□□□ -2.28
KTN1-211ENST00000553710 COMMD10Q9Y6G5 202 aa0.78□□□□□ -2.28
KTN1-211ENST00000553710 PTPRUQ92729 1446 aa0.78□□□□□ -2.28
KTN1-211ENST00000553710 AQRO60306 1485 aaKnown RBP eCLIP0.78□□□□□ -2.28
KTN1-211ENST00000553710 ATP10AO60312 1499 aa0.78□□□□□ -2.28
KTN1-211ENST00000553710 ARAP3Q8WWN8 1544 aa0.78□□□□□ -2.28
KTN1-211ENST00000553710 PREX2Q70Z35 1606 aa0.78□□□□□ -2.29
KTN1-211ENST00000553710 RGPD1P0DJD0 1748 aa0.78□□□□□ -2.29
KTN1-211ENST00000553710 DCHS2Q6V1P9 2916 aa0.78□□□□□ -2.29
KTN1-211ENST00000553710 MGAQ8IWI9 3026 aa0.78□□□□□ -2.29
KTN1-211ENST00000553710 SSPOA2VEC9 5147 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 ASXL3Q9C0F0 2248 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 AKAP9Q99996 3911 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 PRKDCP78527 4128 aaKnown RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 A0A0U1RQK1 487 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 A0A1W2PPQ1 181 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 LOC390937A0A1W2PQ73 354 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 SIGLEC5O15389 551 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 PAPSS1O43252 624 aaPredicted RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 SNAI2O43623 268 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 RPS6KA5O75582 802 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 LUC7L3O95232 432 aaKnown RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 YES1P07947 543 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 SAGP10523 405 aaPredicted RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 ZNF823P16415 610 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 ARL3P36405 182 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 MAGEA9P43362 315 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 PAX2Q02962 417 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 HSPB3Q12988 150 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 NONOQ15233 471 aaKnown RBP eCLIP0.77□□□□□ -2.29
KTN1-211ENST00000553710 KRT39Q6A163 491 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 C2orf66Q6UXQ4 117 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 MACC1Q6ZN28 852 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 NUFIP2Q7Z417 695 aaKnown RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 DND1Q8IYX4 353 aaKnown RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 DEFB123Q8N688 67 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 ZNF491Q8N8L2 437 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 RASGEF1AQ8N9B8 481 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 MCUQ8NE86 351 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 NSUN4Q96CB9 384 aaKnown RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 RBMXL1Q96E39 390 aaKnown RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 RCHY1Q96PM5 261 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 CUEDC2Q9H467 287 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 ACTL8Q9H568 366 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 RNF121Q9H920 327 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 PPCSQ9HAB8 311 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 C3orf14Q9HBI5 128 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 CDH20Q9HBT6 801 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 UBN1Q9NPG3 1134 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 KLHL21Q9UJP4 597 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 CRYL1Q9Y2S2 319 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 ARID4BQ4LE39 1312 aaPredicted RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 CNTNAP1P78357 1384 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 CRB1P82279 1406 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 FGD6Q6ZV73 1430 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 IFT140Q96RY7 1462 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 ZMYM4Q5VZL5 1548 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 TULP4Q9NRJ4 1543 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 SYNMO15061 1565 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 TARBP1Q13395 1621 aaKnown RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 THSD7BQ9C0I4 1608 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 COL5A1P20908 1838 aaPredicted RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 PLXNA3P51805 1871 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 CACNA1DQ01668 2161 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 CSPG4Q6UVK1 2322 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 DMBT1Q9UGM3 2413 aaPredicted RBP0.77□□□□□ -2.29
KTN1-211ENST00000553710 HIVEP1P15822 2718 aa0.77□□□□□ -2.29
KTN1-211ENST00000553710 STAB2Q8WWQ8 2551 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 MED13LQ71F56 2210 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 ZNF142P52746 1687 aaPredicted RBP0.76□□□□□ -2.29
KTN1-211ENST00000553710 SHROOM2Q13796 1616 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 COL22A1Q8NFW1 1626 aaPredicted RBP0.76□□□□□ -2.29
KTN1-211ENST00000553710 NRXN3Q9Y4C0 1643 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 ABCA8O94911 1581 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 GLI3P10071 1580 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 ADGRB3O60242 1522 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 ARHGEF12Q9NZN5 1544 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 PXDNLA1KZ92 1463 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 PLA2R1Q13018 1463 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 RAPGEF2Q9Y4G8 1499 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 TRAV24A0A0B4J272 114 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 IGHV3-35A0A0C4DH35 117 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 LOC105371045A0A1W2PR82 267 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 A8MU76 341 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 SAP18O00422 153 aaKnown RBP0.76□□□□□ -2.29
KTN1-211ENST00000553710 GPAA1O43292 621 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 SIX3O95343 332 aaPredicted RBP0.76□□□□□ -2.29
KTN1-211ENST00000553710 IGLV3-19P01714 112 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 CD4P01730 458 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 LAMP2P13473 410 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 DNASE1P24855 282 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 ALDH3B1P43353 468 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 SLC1A6P48664 564 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 TRPC1P48995 793 aa0.76□□□□□ -2.29
KTN1-211ENST00000553710 BTG1P62324 171 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms