RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TRMOQ9BU70 441 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 APOOQ9BUR5 198 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 DDA1Q9BW61 102 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 TEX12Q9BXU0 123 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 PRSS22Q9GZN4 317 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NPFFR1Q9GZQ6 430 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 LHPPQ9H008 270 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NACA2Q9H009 215 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MIS12Q9H081 205 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 TKTL2Q9H0I9 626 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 GANQ9H2C0 597 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 RDH14Q9HBH5 336 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 RANGRFQ9HD47 186 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MRPL40Q9NQ50 206 aaKnown RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 FBXO8Q9NRD0 319 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 DECR2Q9NUI1 292 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 SPASTQ9UBP0 616 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 CNOT8Q9UFF9 292 aaKnown RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 APOBEC3BQ9UH17 382 aaKnown RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 IL36AQ9UHA7 158 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ERRFI1Q9UJM3 462 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 ANAPC2Q9UJX6 822 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 RPS6KA6Q9UK32 745 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MAN1B1Q9UKM7 699 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MAU2Q9Y6X3 613 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 A3GALT2U3KPV4 340 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 UNC13CQ8NB66 2214 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NBEAL1Q6ZS30 2694 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 NSD1Q96L73 2696 aaPredicted RBP2.27□□□□□ -2.05
CPSF6-207ENST00000551516 COL6A5A8TX70 2615 aa2.27□□□□□ -2.05
CPSF6-207ENST00000551516 MN1Q10571 1320 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TRPM6Q9BX84 2022 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 A0A1W2PQ09 198 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CPED1A4D0V7 1026 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 A6NNC1 897 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 A8MZ25 164 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 TCP11X1B4DZS4 312 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF814B7Z6K7 855 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 F5H5T6 163 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 J3KR12 359 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 M0QYV0 167 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 E2F3O00716 465 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GAPDHSO14556 408 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ADAM10O14672 748 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CHUKO15111 745 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CETN3O15182 167 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CALUO43852 315 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF500O60304 480 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PRAMEF11O60813 436 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RNASEH1O60930 286 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CNOT3O75175 753 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GPC4O75487 556 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RBMXL2O75526 392 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GRAP2O75791 330 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RECQL5O94762 991 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RGS11O94810 467 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 NKX2-2O95096 273 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 OR2C1O95371 312 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CLDN7O95471 211 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 POP4O95707 220 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CPNE6O95741 557 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MOCS2O96007 188 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 IFNA2P01563 188 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SLPIP03973 132 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 RPLP0P05388 317 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 IVLP07476 585 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ANKRD34CP0C6C1 535 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SLC2A3P11169 496 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CCNB1P14635 433 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 KELP23276 732 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MYF6P23409 242 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 AK4P27144 223 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CD82P27701 267 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CHATP28329 748 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GARSP41250 739 aaKnown RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MMP13P45452 471 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 GABRA4P48169 554 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 LMAN1P49257 510 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SUOXP51687 545 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CLCNKAP51800 687 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 HMGA2P52926 109 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 MLLT10P55197 1068 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 OR1D5P58170 312 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ST8SIA6P61647 398 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 IFI35P80217 286 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 ZBED6P86452 979 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 SORDQ00796 357 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PPARDQ03181 441 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 LRRC63Q05C16 580 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 FAM27E3Q08E93 113 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CDC20Q12834 499 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 LRMPQ12912 555 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 NAE1Q13564 534 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 DPYSQ14117 519 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 IRF3Q14653 427 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 STK38Q15208 465 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 CA9Q16790 459 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 C15orf59Q2T9L4 293 aaPredicted RBP2.26□□□□□ -2.05
CPSF6-207ENST00000551516 C14orf28Q4W4Y0 310 aa2.26□□□□□ -2.05
CPSF6-207ENST00000551516 PYCR3Q53H96 274 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms