RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 RNF6Q9Y252 685 aa13.11□□□□□ -0.31
DDX11-228ENST00000545115 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
DDX11-228ENST00000545115 ADGRG4Q8IZF6 3080 aa13.11□□□□□ -0.31
DDX11-228ENST00000545115 PINLYPA6NC86 204 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 FAM90A27PA6NNH2 459 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 FAM166BA8MTA8 275 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 FOXO6A8MYZ6 492 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 PHGDHO43175 533 aaKnown RBP13.1□□□□□ -0.31
DDX11-228ENST00000545115 CCDC166P0CW27 439 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 STMN1P16949 149 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 IGFBP2P18065 325 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 CD22P20273 847 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 RPL21P46778 160 aaKnown RBP13.1□□□□□ -0.31
DDX11-228ENST00000545115 HK2P52789 917 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 CBLBQ13191 982 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 LAPTM5Q13571 262 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 SERTAD2Q14140 314 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 EMC4Q5J8M3 183 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 RTL4Q6ZR62 310 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 GK5Q6ZS86 529 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 SLC22A16Q86VW1 577 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 RPRMLQ8N4K4 120 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 GOLM1Q8NBJ4 401 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 PDPRQ8NCN5 879 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 BBOF1Q8ND07 529 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 OR8K3Q8NH51 312 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 LILRB4Q8NHJ6 448 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 PYROXD1Q8WU10 500 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 PTPMT1Q8WUK0 201 aaPredicted RBP13.1□□□□□ -0.31
DDX11-228ENST00000545115 F2RL3Q96RI0 385 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 CPNE1Q99829 537 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 TBCDQ9BTW9 1192 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 TTTY12Q9BZ98 90 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 OR8D2Q9GZM6 311 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 KCNF1Q9H3M0 494 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 PRDM7Q9NQW5 492 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 CD274Q9NZQ7 290 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 SNX24Q9Y343 169 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 SAR1BQ9Y6B6 198 aa13.1□□□□□ -0.31
DDX11-228ENST00000545115 POLQO75417 2590 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 MYOCOSA0A1B0GUC4 107 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 C17orf105B2RV13 164 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 NPIPA2E9PIF3 369 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 NPIPA3F8WFD2 350 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 CCNT2O60583 730 aaKnown RBP13.09□□□□□ -0.31
DDX11-228ENST00000545115 LDB3O75112 727 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 S100BP04271 92 aaPredicted RBP13.09□□□□□ -0.31
DDX11-228ENST00000545115 TNNI3P19429 210 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 PAFAH1B1P43034 410 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 MSH2P43246 934 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 NR0B1P51843 470 aaKnown RBP13.09□□□□□ -0.31
DDX11-228ENST00000545115 RNF4P78317 190 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 IRF8Q02556 426 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 TFF3Q07654 80 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 CHIT1Q13231 466 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 OR4D1Q15615 310 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 TBCCQ15814 346 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 HIST2H2ACQ16777 129 aaPredicted RBP13.09□□□□□ -0.31
DDX11-228ENST00000545115 NDUFAF5Q5TEU4 345 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 HIST2H2AA3Q6FI13 130 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 ZNF793Q6ZN11 406 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 ACAD11Q709F0 780 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 LRRC70Q7Z2Q7 622 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 C7orf57Q8NEG2 295 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 OR5L2Q8NGL0 311 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 SLC2A12Q8TD20 617 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 SREK1Q8WXA9 508 aaKnown RBP13.09□□□□□ -0.31
DDX11-228ENST00000545115 SCYL1Q96KG9 808 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 GPR22Q99680 433 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 RBBP8Q99708 897 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 NAPGQ99747 312 aaPredicted RBP13.09□□□□□ -0.31
DDX11-228ENST00000545115 MAPKAP1Q9BPZ7 522 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 FAM173AQ9BQD7 235 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 MS4A8Q9BY19 250 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 PRM3Q9NNZ6 103 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 KCNJ16Q9NPI9 418 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 NPDC1Q9NQX5 325 aaPredicted RBP13.09□□□□□ -0.31
DDX11-228ENST00000545115 COPS7AQ9UBW8 275 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 PTBP2Q9UKA9 531 aaKnown RBP13.09□□□□□ -0.31
DDX11-228ENST00000545115 RNF112Q9ULX5 631 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 SPACA6W5XKT8 324 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 DCHS2Q6V1P9 2916 aa13.09□□□□□ -0.31
DDX11-228ENST00000545115 A0A0G2JMM0 328 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 A0A1W2PPB8 328 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 A0A1W2PRS3 328 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 NKX2-6A6NCS4 301 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 OR14I1A6ND48 311 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 FIGNL2A6NMB9 653 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 KIR3DP1A8MWS1 328 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 CXorf49A8MYA2 514 aaPredicted RBP13.08□□□□□ -0.32
DDX11-228ENST00000545115 G3V3Y1 287 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 BCKDKO14874 412 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 GLSO94925 669 aaPredicted RBP13.08□□□□□ -0.32
DDX11-228ENST00000545115 SCELO95171 688 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 IGHG3P01860 377 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 EPORP19235 508 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 CNR1P21554 472 aa13.08□□□□□ -0.32
DDX11-228ENST00000545115 ATP5A1P25705 553 aaKnown RBP13.08□□□□□ -0.32
DDX11-228ENST00000545115 MSX1P28360 303 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms