RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 SLAMF1Q13291 335 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 MRM1Q6IN84 353 aaKnown RBP14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 LETMD1Q6P1Q0 360 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 MILR1Q7Z6M3 343 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 ATCAYQ86WG3 371 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 CRLF3Q8IUI8 442 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 LGI4Q8N135 537 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 ARMC10Q8N2F6 343 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 KIF2BQ8N4N8 673 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 EFCAB3Q8N7B9 438 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 APCDD1LQ8NCL9 501 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 EPS8L3Q8TE67 593 aaKnown RBP14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 L3HYPDHQ96EM0 354 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 MAGEB10Q96LZ2 347 aaPredicted RBP14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 TMEM237Q96Q45 408 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 CENPKQ9BS16 269 aa14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 DDX31Q9H8H2 851 aaKnown RBP14.45□□□□□ -0.1
ECHDC2-223ENST00000542552 A0A0A6YYD5 115 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 TRAV17A0A0B4J275 112 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 CLEC18AA5D8T8 446 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 OR5H15A6NDH6 313 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 G3V2L1 256 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 MAN1A2O60476 641 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 EEDO75530 441 aaKnown RBP14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 SEMA3DO95025 777 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 TSPAN8P19075 237 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 CRHR1P34998 444 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 CLCQ05315 142 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 MEP1AQ16819 746 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 FCRLBQ6BAA4 426 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 EMBQ6PCB8 327 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 CLEC18BQ6UXF7 455 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 GPR180Q86V85 440 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 SLC22A9Q8IVM8 553 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 BEST3Q8N1M1 668 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 SLC5A8Q8N695 610 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 CLEC18CQ8NCF0 446 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 B3GNT7Q8NFL0 401 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 OR1N1Q8NGS0 311 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 ANKRD9Q96BM1 317 aaPredicted RBP14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 MTFMTQ96DP5 389 aaKnown RBP14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 CNDP1Q96KN2 507 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 SERPINI1Q99574 410 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 ADAP2Q9NPF8 381 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 ASF1BQ9NVP2 202 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 MS4A12Q9NXJ0 267 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 VTI1BQ9UEU0 232 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 TRPS1Q9UHF7 1281 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 ATG4BQ9Y4P1 393 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 ASB4Q9Y574 426 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 COPG1Q9Y678 874 aaKnown RBP14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 SPACA6W5XKT8 324 aa14.44□□□□□ -0.1
ECHDC2-223ENST00000542552 A8MUA0 341 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 TCP11X1B4DZS4 312 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 CDK2AP1O14519 115 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 PROM1O43490 865 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 GLRA3O75311 464 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 VPS4BO75351 444 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 MYO1DO94832 1006 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 SUPT7LO94864 414 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 ZIC2O95409 532 aaPredicted RBP14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 F10P00742 488 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 PROCP04070 461 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 UQCRHP07919 91 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 KRT15P19012 456 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 CPN2P22792 545 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 ARL1P40616 181 aaPredicted RBP14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 HNRNPH2P55795 449 aaKnown RBP14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 IGLV3-21P80748 117 aaPredicted RBP14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 IFT88Q13099 833 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 ELAVL1Q15717 326 aaKnown RBP14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 CLNKQ7Z7G1 428 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 OR2W6PQ8NHA6 318 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 TRPC4APQ8TEL6 797 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 PTPMT1Q8WUK0 201 aaPredicted RBP14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 CAVIN3Q969G5 261 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 ZNF382Q96SR6 550 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 ALOXE3Q9BYJ1 711 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 PRM3Q9NNZ6 103 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 PNO1Q9NRX1 252 aaKnown RBP14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 PHF11Q9UIL8 331 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 FBXW2Q9UKT8 454 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 VPS4AQ9UN37 437 aa14.43□□□□□ -0.1
ECHDC2-223ENST00000542552 UTP20O75691 2785 aaKnown RBP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 SMIM23A6NLE4 172 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 TMPRSS11DO60235 418 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 PLIN3O60664 434 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 LDB3O75112 727 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 FAM58BPP0C7Q3 252 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 CCT5P48643 541 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 TAS2R50P59544 299 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 TNFRSF17Q02223 184 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 SLC18A2Q05940 514 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 STX4Q12846 297 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 TUBA3CQ13748 450 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 SERTAD2Q14140 314 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 TTC19Q6DKK2 380 aaPredicted RBP14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 TUBA3EQ6PEY2 450 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 ZYG11AQ6WRX3 759 aa14.42□□□□□ -0.1
ECHDC2-223ENST00000542552 RPS19BP1Q86WX3 136 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms