RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GDPD1Q8N9F7 314 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 PSD4Q8NDX1 1056 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 ELMO1Q92556 727 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 MTERF3Q96E29 417 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 MSLNLQ96KJ4 702 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 RC3H2Q9HBD1 1191 aaKnown RBP11.61□□□□□ -0.55
CPSF7-218ENST00000537641 IL21Q9HBE4 155 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 ZNF334Q9HCZ1 680 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-218ENST00000537641 STOX2Q9P2F5 926 aaPredicted RBP11.61□□□□□ -0.55
CPSF7-218ENST00000537641 MUTYHQ9UIF7 546 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 TMPRSS11EQ9UL52 423 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 SSR3Q9UNL2 185 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 MGAT4BQ9UQ53 548 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 EXO1Q9UQ84 846 aaKnown RBP11.61□□□□□ -0.55
CPSF7-218ENST00000537641 RPL36Q9Y3U8 105 aaKnown RBP11.61□□□□□ -0.55
CPSF7-218ENST00000537641 PLXNA2O75051 1894 aa11.61□□□□□ -0.55
CPSF7-218ENST00000537641 GNG14A0A1W2PPG7 69 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 A0A1W2PQ09 198 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 TRBC2A0A5B9 178 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 ARHGEF33A8MVX0 844 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 A8MX80 341 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 TNFRSF10AO00220 468 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 QSOX1O00391 747 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 AP3D1O14617 1153 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 ENTPD6O75354 484 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 TRIM3O75382 744 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 ZNF821O75541 412 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 SLCO2B1O94956 709 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 C6orf47O95873 294 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 SPINT3P49223 89 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 PTSQ03393 145 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 HYAL2Q12891 473 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 ILKQ13418 452 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 TP53BP2Q13625 1128 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 C1DQ13901 141 aaKnown RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 LARS2Q15031 903 aaKnown RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 SF1Q15637 639 aaKnown RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 BAK1Q16611 211 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 GLYR1Q49A26 553 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 NOXA1Q86UR1 476 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 LAX1Q8IWV1 398 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 CLDN22Q8N7P3 220 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 ARL14EPQ8N8R7 260 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 PROKR2Q8NFJ6 384 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 OR56A3Q8NH54 315 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 ASZ1Q8WWH4 475 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 FAM83CQ9BQN1 747 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 TMEM246Q9BRR3 403 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 UCK2Q9BZX2 261 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 SUV39H2Q9H5I1 410 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 MYNNQ9NPC7 610 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 GULP1Q9UBP9 304 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 LSM7Q9UK45 103 aaKnown RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 TBX21Q9UL17 535 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 SLC6A14Q9UN76 642 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 NUP214P35658 2090 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 ABHD14A-ACY1A0A1B0GW23 586 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 KRT87PA6NCN2 255 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 CCDC182A6NF36 153 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 CACNB4O00305 520 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 TPST2O60704 377 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 MYCP01106 439 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 GASTP01350 101 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 CATP04040 527 aaKnown RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 FURINP09958 794 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 CCL5P13501 91 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 VEGFBP49765 207 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 GNG2P59768 71 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 ARPC4P59998 168 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 RPS13P62277 151 aaKnown RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 LMAN2Q12907 356 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 NAE1Q13564 534 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 DOC2BQ14184 412 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 GPAT3Q53EU6 434 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 YIF1BQ5BJH7 314 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 TXNDC8Q6A555 127 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 MED27Q6P2C8 311 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 SERPINA13PQ6UXR4 307 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 UNC5DQ6UXZ4 953 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 HSDL2Q6YN16 418 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 LIX1LQ8IVB5 337 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 GPR65Q8IYL9 337 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 NANOGP1Q8N7R0 232 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 OR7G3Q8NG95 312 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 OR7G1Q8NGA0 311 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 HUS1BQ8NHY5 278 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 VWCEQ96DN2 955 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 MCOLN1Q9GZU1 580 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 RNF208Q9H0X6 261 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 SYNDIG1Q9H7V2 258 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 MRPL17Q9NRX2 175 aaKnown RBP11.6□□□□□ -0.55
CPSF7-218ENST00000537641 SAGE1Q9NXZ1 904 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 KLHL20Q9Y2M5 609 aa11.6□□□□□ -0.55
CPSF7-218ENST00000537641 H3BM21 787 aa11.59□□□□□ -0.55
CPSF7-218ENST00000537641 FOXE1O00358 373 aaPredicted RBP11.59□□□□□ -0.55
CPSF7-218ENST00000537641 FAAHO00519 579 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms