RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 KEAP1Q14145 624 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 MAD2L1BPQ15013 274 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PARP15Q460N3 678 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 FAM76BQ5HYJ3 339 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CLLU1Q5K131 121 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ZSWIM9Q86XI8 627 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TOMM5Q8N4H5 51 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 KLK6Q92876 244 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 FGF13Q92913 245 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PYURFQ96I23 114 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ITCHQ96J02 903 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ART5Q96L15 291 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CCDC115Q96NT0 180 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 CATSPERBQ9H7T0 1116 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 BEX1Q9HBH7 125 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 TREM1Q9NP99 234 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ENAMQ9NRM1 1142 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 DCAF16Q9NXF7 216 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 AKAP7Q9P0M2 348 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 REV1Q9UBZ9 1251 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 DIMT1Q9UNQ2 313 aaKnown RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 PLEKHA6Q9Y2H5 1048 aa6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 OAS3Q9Y6K5 1087 aaKnown RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 ZFHX2Q9C0A1 2572 aaPredicted RBP6.53□□□□□ -1.36
TGFBR3-209ENST00000532540 LOC102723532A0A0G2JNH3 316 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM72CH0Y354 149 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 PRMT3O60678 531 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC43A1O75387 559 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 LALBAP00709 142 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 GLAP06280 429 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC2A3P11169 496 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ANXA8P13928 327 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 GABRB3P28472 473 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 HOXC8P31273 242 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SSTR4P31391 388 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 PIK3CBP42338 1070 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 HOXA1P49639 335 aaPredicted RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 MAN2A2P49641 1150 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 DIO3P55073 304 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 AP1S2P56377 157 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 INCA1Q0VD86 236 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 NPRL3Q12980 569 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ASAH1Q13510 395 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 CAMK2GQ13555 558 aaPredicted RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SF3A2Q15428 464 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SMN1Q16637 294 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 AP5B1Q2VPB7 878 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC25A52Q3SY17 297 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM72AQ5TYM5 149 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM72DQ6L9T8 149 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 LIN54Q6MZP7 749 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TBPL2Q6SJ96 375 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 GDPGP1Q6ZNW5 385 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 USP51Q70EK9 711 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC46A3Q7Z3Q1 461 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TSPAN33Q86UF1 283 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM72BQ86X60 149 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 IZUMO1Q8IYV9 350 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF567Q8N184 647 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ATP6V1C2Q8NEY4 427 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 NR4A3Q92570 626 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 YIPF6Q96EC8 236 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SORBS1Q9BX66 1292 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 VN1R3Q9BXE9 311 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 PITHD1Q9GZP4 211 aaPredicted RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 OR51J1Q9H342 316 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF768Q9H5H4 540 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ZDHHC6Q9H6R6 413 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 GALNT9Q9HCQ5 603 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TAS2R13Q9NYV9 303 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 AHCTF1Q8WYP5 2266 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 A0A075B6Q4 140 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 LINC00862A6NCI5 91 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 CLCA1A8K7I4 914 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 M0QZQ0 153 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 RFXANKO14593 260 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ADAMDEC1O15204 470 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 DIRAS1O95057 198 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 GOT2P00505 430 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SERPINA3P01011 423 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 CD2P06729 351 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ACSL1P33121 698 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 CSTF2P33240 577 aaKnown RBP eCLIP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TGFBR1P36897 503 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 LIPAP38571 399 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 MAP2K6P52564 334 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ISL1P61371 349 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC3A1Q07837 685 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 GRIK2Q13002 908 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 SEMA3BQ13214 749 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 EXOSC2Q13868 293 aaKnown RBP6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 NTRK2Q16620 822 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 C21orf62-AS1Q17RA5 79 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 NDUFAF6Q330K2 333 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 TPGS2Q68CL5 300 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 BEND4Q6ZU67 534 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 USP45Q70EL2 814 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 ADGRG3Q86Y34 549 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 LNX2Q8N448 690 aa6.52□□□□□ -1.37
TGFBR3-209ENST00000532540 OR10Q1Q8NGQ4 319 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms