RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 STARD8Q92502 1023 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 TM4SF18Q96CE8 201 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 C19orf60Q96EN9 201 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 PPP3R2Q96LZ3 170 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 YIPF2Q9BWQ6 316 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 MEAF6Q9HAF1 191 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 LRTM1Q9HBL6 345 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 PRM3Q9NNZ6 103 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 SLCO1B3Q9NPD5 702 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 ATG4BQ9Y4P1 393 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 MMACHCQ9Y4U1 282 aa15.11■□□□□ 0.01
BRK1-201ENST00000530758 MRPS18BQ9Y676 258 aaKnown RBP15.11■□□□□ 0.01
BRK1-201ENST00000530758 ZNF891A8MT65 544 aaPredicted RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 IDSB3KWA1 339 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 FAM227AF5H4B4 570 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 K7ENP7 123 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 GUCY1B2O75343 617 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 SEC22BO75396 215 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 JRKO75564 520 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 MMP11P24347 488 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 TIA1P31483 386 aaKnown RBP eCLIP15.1■□□□□ 0.017e-18■□□□□ 10.2
BRK1-201ENST00000530758 MDH1P40925 334 aaKnown RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 EFNA3P52797 238 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 EMP2P54851 167 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 RPS18P62269 152 aaKnown RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 ERV3-1Q14264 604 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 RFTN2Q52LD8 501 aaPredicted RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 SPDYAQ5MJ70 313 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 INO80CQ6PI98 192 aaPredicted RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 CCDC81Q6ZN84 652 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 WDR75Q8IWA0 830 aaKnown RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 DDIASQ8IXT1 998 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 IP6K3Q96PC2 410 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 VN1R1Q9GZP7 353 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 SOX17Q9H6I2 414 aaPredicted RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 RIC8BQ9NVN3 520 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 MRPS33Q9Y291 106 aaKnown RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 CLDN16Q9Y5I7 305 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 SPACA6W5XKT8 324 aa15.1■□□□□ 0.01
BRK1-201ENST00000530758 SMG1Q96Q15 3661 aaKnown RBP15.1■□□□□ 0.01
BRK1-201ENST00000530758 MGAQ8IWI9 3026 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 LOC102723996A0A087X1L8 192 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 IGKV3D-11A0A0A0MRZ8 115 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 A0A1W2PR48 441 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 ARHGAP10A1A4S6 786 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 SYNDIG1LA6NDD5 238 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 PSMD12O00232 456 aaPredicted RBP15.09■□□□□ 0.01
BRK1-201ENST00000530758 CTNSO60931 367 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 VPS4BO75351 444 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 SKAP2O75563 359 aaPredicted RBP15.09■□□□□ 0.01
BRK1-201ENST00000530758 TGDSO95455 350 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 GBAP04062 536 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 ALOX15P16050 662 aaPredicted RBP15.09■□□□□ 0.01
BRK1-201ENST00000530758 CPN2P22792 545 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 MAPK12P53778 367 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 TNFRSF17Q02223 184 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 BIKQ13323 160 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 C6orf136Q5SQH8 315 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 NOXRED1Q6NXP6 359 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 LARP4Q71RC2 724 aaKnown RBP eCLIP15.09■□□□□ 0.012e-7■■□□□ 13.8
BRK1-201ENST00000530758 SCUBE1Q8IWY4 988 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 PARP9Q8IXQ6 854 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 TMEM52Q8NDY8 209 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 TANKQ92844 425 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 MAELQ96JY0 434 aaKnown RBP15.09■□□□□ 0.01
BRK1-201ENST00000530758 CRB3Q9BUF7 120 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 C3orf18Q9UK00 162 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 FBXW2Q9UKT8 454 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 MKL2Q9ULH7 1088 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 CROCCQ5TZA2 2017 aa15.09■□□□□ 0.01
BRK1-201ENST00000530758 TRPC5OSA6NMA1 111 aa15.08■□□□□ 0
BRK1-201ENST00000530758 CLDN4O14493 209 aa15.08■□□□□ 0
BRK1-201ENST00000530758 NKX2-8O15522 239 aa15.08■□□□□ 0
BRK1-201ENST00000530758 PCDH7O60245 1069 aa15.08■□□□□ 0
BRK1-201ENST00000530758 PRMT3O60678 531 aa15.08■□□□□ 0
BRK1-201ENST00000530758 EDF1O60869 148 aaKnown RBP15.08■□□□□ 0
BRK1-201ENST00000530758 ALOX12BO75342 701 aa15.08■□□□□ 0
BRK1-201ENST00000530758 MYO1DO94832 1006 aa15.08■□□□□ 0
BRK1-201ENST00000530758 HEXBP07686 556 aa15.08■□□□□ 0
BRK1-201ENST00000530758 TLX1P31314 330 aaPredicted RBP15.08■□□□□ 0
BRK1-201ENST00000530758 BUD31P41223 144 aaPredicted RBP15.08■□□□□ 0
BRK1-201ENST00000530758 HNRNPFP52597 415 aaKnown RBP15.08■□□□□ 0
BRK1-201ENST00000530758 TMPRSS3P57727 454 aa15.08■□□□□ 0
BRK1-201ENST00000530758 FOXL2P58012 376 aa15.08■□□□□ 0
BRK1-201ENST00000530758 IGLV3-21P80748 117 aaPredicted RBP15.08■□□□□ 0
BRK1-201ENST00000530758 EMX2Q04743 252 aa15.08■□□□□ 0
BRK1-201ENST00000530758 IL10RAQ13651 578 aa15.08■□□□□ 0
BRK1-201ENST00000530758 NR6A1Q15406 480 aa15.08■□□□□ 0
BRK1-201ENST00000530758 PDCD2Q16342 344 aaPredicted RBP15.08■□□□□ 0
BRK1-201ENST00000530758 ATP6AP1LQ52LC2 224 aa15.08■□□□□ 0
BRK1-201ENST00000530758 FAM69BQ5VUD6 431 aa15.08■□□□□ 0
BRK1-201ENST00000530758 SHISA6Q6ZSJ9 500 aa15.08■□□□□ 0
BRK1-201ENST00000530758 PPP1R32Q7Z5V6 425 aa15.08■□□□□ 0
BRK1-201ENST00000530758 RAB43Q86YS6 212 aa15.08■□□□□ 0
BRK1-201ENST00000530758 ZSCAN1Q8NBB4 408 aa15.08■□□□□ 0
BRK1-201ENST00000530758 STON2Q8WXE9 905 aa15.08■□□□□ 0
BRK1-201ENST00000530758 THAP4Q8WY91 577 aa15.08■□□□□ 0
BRK1-201ENST00000530758 BBC3Q96PG8 261 aaPredicted RBP15.08■□□□□ 0
BRK1-201ENST00000530758 CSF3RQ99062 836 aa15.08■□□□□ 0
BRK1-201ENST00000530758 NUF2Q9BZD4 464 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms