RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PLCH1Q4KWH8 1693 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 C5orf51A6NDU8 294 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 C5orf52A6NGY3 159 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 E2F3O00716 465 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 BUB1O43683 1085 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 OR10H2O60403 315 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 NGFP01138 241 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 FGF4P08620 206 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 TPM1P09493 284 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 C8orf89P0DMQ9 161 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 THRBP10828 461 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 PPP2R1AP30153 589 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 CEACAM8P31997 349 aaPredicted RBP5.25□□□□□ -1.57
PCF11-202ENST00000528336 MAP2K2P36507 400 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 WNT5AP41221 380 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 FRKP42685 505 aaPredicted RBP5.25□□□□□ -1.57
PCF11-202ENST00000528336 KCNJ1P48048 391 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 VCPP55072 806 aaKnown RBP5.25□□□□□ -1.57
PCF11-202ENST00000528336 HAND2P61296 217 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 SPIBQ01892 262 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 GCNT1Q02742 428 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 GFPT1Q06210 699 aaPredicted RBP5.25□□□□□ -1.57
PCF11-202ENST00000528336 ABRQ12979 859 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 EFTUD2Q15029 972 aaKnown RBP eCLIP5.25□□□□□ -1.57
PCF11-202ENST00000528336 TAZQ16635 292 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 KIAA1644Q3SXP7 199 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 CLEC2AQ6UVW9 174 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 LINGO4Q6UY18 593 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 CENPVQ7Z7K6 275 aaPredicted RBP5.25□□□□□ -1.57
PCF11-202ENST00000528336 OR2T34Q8NGX1 318 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 OR8K3Q8NH51 312 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 EXOC6Q8TAG9 804 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 FGFBP3Q8TAT2 258 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 GRHL3Q8TE85 626 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 ARHGAP45Q92619 1136 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 SPDL1Q96EA4 605 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 C11orf24Q96F05 449 aaPredicted RBP5.25□□□□□ -1.57
PCF11-202ENST00000528336 SPATA13Q96N96 652 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 ZSCAN5AQ9BUG6 496 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 RAB33BQ9H082 229 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 P2RY12Q9H244 342 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 YY1AP1Q9H869 796 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 SIX2Q9NPC8 291 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 PRMT7Q9NVM4 692 aaPredicted RBP5.25□□□□□ -1.57
PCF11-202ENST00000528336 DPP3Q9NY33 737 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 SPG21Q9NZD8 308 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 KCNJ14Q9UNX9 436 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 NRAPQ86VF7 1730 aa5.25□□□□□ -1.57
PCF11-202ENST00000528336 CDK12Q9NYV4 1490 aaPredicted RBP5.25□□□□□ -1.57
PCF11-202ENST00000528336 UBE4BO95155 1302 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 IL16Q14005 1332 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 CRB1P82279 1406 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 PEAK1Q9H792 1746 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 IGLV9-49A0A0B4J1Y8 123 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 NCF1BA6NI72 391 aaPredicted RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 SDR42E2A6NKP2 422 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 NCF1CA8MVU1 366 aaPredicted RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 PRDM1O75626 825 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 TOMM70O94826 608 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 TRUB2O95900 331 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 PAK4O96013 591 aaPredicted RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 S100A9P06702 114 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 FRMD6-AS1P0C7T7 363 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 HNRNPA2B1P22626 353 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 RDXP35241 583 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 HADHBP55084 474 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 OVGP1Q12889 678 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 TRDNQ13061 729 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 CEBPEQ15744 281 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 HADHQ16836 314 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 EPC2Q52LR7 807 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 PHLDA2Q53GA4 152 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 FBXO48Q5FWF7 155 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 C1orf185Q5T7R7 199 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 FAM53AQ6NSI3 398 aaPredicted RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 CTR9Q6PD62 1173 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 TOM1L2Q6ZVM7 507 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 SPATA21Q7Z572 469 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 EIF1ADQ8N9N8 165 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 STEAP2Q8NFT2 490 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 SPATA3Q8NHX4 192 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 FAM76AQ8TAV0 307 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 RNASE8Q8TDE3 154 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 RAPGEF5Q92565 580 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 C19orf60Q96EN9 201 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 GAL3ST1Q99999 423 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 TPPP3Q9BW30 176 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 ARRDC1-AS1Q9H2J1 176 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 RMND5AQ9H871 391 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 FAM114A2Q9NRY5 505 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 DDX25Q9UHL0 483 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 MAD2L2Q9UI95 211 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 GMEB2Q9UKD1 530 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 CLEC4AQ9UMR7 237 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 RIPK3Q9Y572 518 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 DDX49Q9Y6V7 483 aaKnown RBP5.24□□□□□ -1.57
PCF11-202ENST00000528336 LTN1O94822 1766 aa5.24□□□□□ -1.57
PCF11-202ENST00000528336 STK36Q9NRP7 1315 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 C2orf92A0A1B0GVN3 265 aa5.23□□□□□ -1.57
PCF11-202ENST00000528336 FEZF1A0PJY2 475 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms