RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 HAS2Q92819 552 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 RGMAQ96B86 450 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 ZBTB9Q96C00 473 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 SIGLEC12Q96PQ1 595 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 ERVK-6Q9BXR3 956 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 CDCP1Q9H5V8 836 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 LIN28AQ9H9Z2 209 aaKnown RBP12.44□□□□□ -0.42
VEGFA-219ENST00000518824 LYRM4Q9HD34 91 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 STMN3Q9NZ72 180 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 TMCO1Q9UM00 188 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 ATG4BQ9Y4P1 393 aa12.44□□□□□ -0.42
VEGFA-219ENST00000518824 A0A088AWK7 358 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 A0A0A6YYD5 115 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 A0A1W2PS29 197 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 TLDC2A0PJX2 215 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 FGF17O60258 216 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 CTNSO60931 367 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 SUPT7LO94864 414 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 PDYNP01213 254 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 PROCP04070 461 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 CHN1P15882 459 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF10P21506 573 aaPredicted RBP12.43□□□□□ -0.42
VEGFA-219ENST00000518824 CPN2P22792 545 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 ATP5F1P24539 256 aaPredicted RBP12.43□□□□□ -0.42
VEGFA-219ENST00000518824 SERPINB1P30740 379 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 HTR6P50406 440 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 RAP1GDS1P52306 607 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 PRKAA2P54646 552 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 HSD17B7P56937 341 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 TGM3Q08188 693 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 ABHD17BQ5VST6 288 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 FRG2Q64ET8 278 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 EFCAB3Q8N7B9 438 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 SRFBP1Q8NEF9 429 aaKnown RBP12.43□□□□□ -0.42
VEGFA-219ENST00000518824 GRHL3Q8TE85 626 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 THAP3Q8WTV1 239 aaPredicted RBP12.43□□□□□ -0.42
VEGFA-219ENST00000518824 FRG2BQ96QU4 278 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 TAAR6Q96RI8 345 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 BARD1Q99728 777 aaKnown RBP12.43□□□□□ -0.42
VEGFA-219ENST00000518824 CCDC77Q9BR77 488 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 MRPL1Q9BYD6 325 aaKnown RBP12.43□□□□□ -0.42
VEGFA-219ENST00000518824 ALOXE3Q9BYJ1 711 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 ADGRE2Q9UHX3 823 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 ASB4Q9Y574 426 aa12.43□□□□□ -0.42
VEGFA-219ENST00000518824 COPG1Q9Y678 874 aaKnown RBP12.43□□□□□ -0.42
VEGFA-219ENST00000518824 A0A1W2PR48 441 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 DYTNA2CJ06 578 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 GLOD5A6NK44 160 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 FOXE1O00358 373 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 CLDN4O14493 209 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 UBFD1O14562 309 aaKnown RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 GSTA1P08263 222 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 KRT15P19012 456 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TAC1P20366 129 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 IMPDH1P20839 514 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 PTX3P26022 381 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 HPDP32754 393 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 CD96P40200 585 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TSFMP43897 325 aaKnown RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 PMP22Q01453 160 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 CUL3Q13618 768 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TUBA3CQ13748 450 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TLR1Q15399 786 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 NR6A1Q15406 480 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 EIF2S3LQ2VIR3 472 aaKnown RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 GGTA1PQ4G0N0 100 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TTC19Q6DKK2 380 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 SPINK14Q6IE38 97 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TUBA3EQ6PEY2 450 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF227Q86WZ6 799 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 MMP21Q8N119 569 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 ZCCHC7Q8N3Z6 543 aaKnown RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 CDYL2Q8N8U2 506 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 ARMC2Q8NEN0 867 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 PTPMT1Q8WUK0 201 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 NCLNQ969V3 563 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 REPS1Q96D71 796 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 ZNF354BQ96LW1 612 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 KCNA7Q96RP8 456 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 ROGDIQ9GZN7 287 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.42□□□□□ -0.423e-8■■□□□ 11.5
VEGFA-219ENST00000518824 GSTO2Q9H4Y5 243 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TNFRSF12AQ9NP84 129 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TEX10Q9NXF1 929 aaPredicted RBP12.42□□□□□ -0.42
VEGFA-219ENST00000518824 DCDC2Q9UHG0 476 aa12.42□□□□□ -0.42
VEGFA-219ENST00000518824 TRBV11-1A0A0K0K1C0 115 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 CLEC18AA5D8T8 446 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 OR5H15A6NDH6 313 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 TMEM200CA6NKL6 621 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 GABRR3A8MPY1 467 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 HRKO00198 91 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 PROM1O43490 865 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 PLIN3O60664 434 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 GLRA3O75311 464 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 CBX6O95503 412 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 DDAH2O95865 285 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 OTCP00480 354 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 IFNA16P05015 189 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 RNF224P0DH78 156 aa12.41□□□□□ -0.42
VEGFA-219ENST00000518824 CREB1P16220 341 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms