RNA–Protein interactions for RNA: ENST00000518428.1

AC048387.1-201, humanhuman

TSL 3 BASIC

Gene AC048387.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048387.1-201ENST00000518428 PRICKLE1Q96MT3 831 aaPredicted RBP4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 PLEKHG4BQ96PX9 1271 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 RAB40CQ96S21 281 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 POLDIP3Q9BY77 421 aaKnown RBP4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 NACA2Q9H009 215 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 FN3KRPQ9HA64 309 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 CALHM2Q9HA72 323 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 SLC2A4RGQ9NR83 387 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 ETNK2Q9NVF9 386 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 TMEM45AQ9NWC5 275 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 GRID1Q9ULK0 1009 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 TCAF1Q9Y4C2 921 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 ATG4BQ9Y4P1 393 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 HS3ST3A1Q9Y663 406 aa4.82□□□□□ -1.64
AC048387.1-201ENST00000518428 PIK3C2GO75747 1445 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 LAMB4A4D0S4 1761 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 C4BP0C0L5 1744 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 PTPRCP08575 1304 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 GAGE12JA6NER3 117 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 HELTA6NFD8 242 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 PRR32B1ATL7 298 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 E9PI62 339 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 CHEK1O14757 476 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 RNASEH1O60930 286 aaKnown RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 CTAG2O75638 210 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 MT-ND1P03886 318 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 CHRNB1P11230 501 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 SRD5A2P31213 254 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ANP32AP39687 249 aaKnown RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 PLA2G5P39877 138 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 MNDAP41218 407 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 PTGFRP43088 359 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 AVPR1BP47901 424 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 VAMP7P51809 220 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 KCNK10P57789 538 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 NLRP11P59045 1033 aaKnown RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 SELENOVP59797 346 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 CNTN2Q02246 1040 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 SRSF5Q13243 272 aaKnown RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 CDH18Q13634 790 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 KEAP1Q14145 624 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 HSP90B2PQ58FF3 399 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ARMCX4Q5H9R4 360 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 PAPPA-AS1Q5QFB9 102 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ASPHD2Q6ICH7 369 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 TTC27Q6P3X3 843 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 NIPAL3Q6P499 406 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 CBLN3Q6UW01 205 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 DEF8Q6ZN54 512 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ZNF704Q6ZNC4 412 aaPredicted RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 YRDCQ86U90 279 aaKnown RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 PDCL2Q8N4E4 241 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 NOA1Q8NC60 698 aaKnown RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ZNF548Q8NEK5 533 aaPredicted RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 TRPV3Q8NET8 790 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ZNF397Q8NF99 534 aaPredicted RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 GPRC5AQ8NFJ5 357 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 FGFBP3Q8TAT2 258 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 PHYHIPQ92561 330 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 RAB39BQ96DA2 213 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 TMEM19Q96HH6 336 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 OXNAD1Q96HP4 312 aaPredicted RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 LRR1Q96L50 414 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 FAM20AQ96MK3 541 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 MTERF1Q99551 399 aaKnown RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 NDNQ99608 321 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 MTG1Q9BT17 334 aaPredicted RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 MMTAG2Q9BU76 263 aaKnown RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ARRDC1-AS1Q9H2J1 176 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 RIMS4Q9H426 269 aaPredicted RBP4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ZCCHC4Q9H5U6 513 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 EXO5Q9H790 373 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 EVA1AQ9H8M9 152 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 HPS4Q9NQG7 708 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 PLCL2Q9UPR0 1127 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 ERVK-19Q9WJR5 959 aa4.81□□□□□ -1.64
AC048387.1-201ENST00000518428 EIF3AQ14152 1382 aaKnown RBP4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 CDH23Q9H251 3354 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 A0A075B6Q4 140 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 ANTXRLA6NF34 631 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 ASB14A6NK59 587 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 C4orf47A7E2U8 309 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 C15orf62A8K5M9 175 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 ZNF197O14709 1029 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 MDM4O15151 490 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 ZNF208O43345 1280 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 BUD23O43709 281 aaKnown RBP4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 SPOPO43791 374 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 ECE2O60344 883 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 SDC3O75056 442 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 GRAP2O75791 330 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 CPNE6O95741 557 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 PAHP00439 452 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 AGTP01019 485 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 H1F0P07305 194 aaKnown RBP4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 RHOXF2BP0C7M4 288 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 ITGB6P18564 788 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 NCF2P19878 526 aaPredicted RBP4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 CAPGP40121 348 aa4.8□□□□□ -1.64
AC048387.1-201ENST00000518428 CCT6AP40227 531 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms