RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 TRPM5Q9NZQ8 1165 aa12.28□□□□□ -0.44
SMAD1-215ENST00000515385 MBD2Q9UBB5 411 aa12.28□□□□□ -0.44
SMAD1-215ENST00000515385 NDOR1Q9UHB4 597 aa12.28□□□□□ -0.44
SMAD1-215ENST00000515385 CLEC2DQ9UHP7 191 aa12.28□□□□□ -0.44
SMAD1-215ENST00000515385 BAIAP2Q9UQB8 552 aa12.28□□□□□ -0.44
SMAD1-215ENST00000515385 DLGAP4Q9Y2H0 992 aa12.28□□□□□ -0.44
SMAD1-215ENST00000515385 PCDHB11Q9Y5F2 797 aa12.28□□□□□ -0.44
SMAD1-215ENST00000515385 HS3ST4Q9Y661 456 aa12.28□□□□□ -0.44
SMAD1-215ENST00000515385 GBF1Q92538 1859 aa12.27□□□□□ -0.44
SMAD1-215ENST00000515385 GLYATL1P3A0A0U1RQE8 302 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 TLR4O00206 839 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 TAPBPO15533 448 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 ACSM4P0C7M7 580 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 FGF9P31371 208 aaPredicted RBP12.27□□□□□ -0.45
SMAD1-215ENST00000515385 CNR2P34972 360 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 ZNF81P51508 661 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 ERVK-21P61565 698 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 PUDPQ08623 228 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 DSG2Q14126 1118 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.45
SMAD1-215ENST00000515385 FAM26DQ5JW98 314 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 FAM182BQ5T319 152 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 LBX2Q6XYB7 198 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 CTU1Q7Z7A3 348 aaKnown RBP12.27□□□□□ -0.45
SMAD1-215ENST00000515385 OR4K2Q8NGD2 314 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 OR5T2Q8NGG2 359 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 OR6M1Q8NGM8 313 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 CSGALNACT1Q8TDX6 532 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 SLC9A6Q92581 669 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 SGK3Q96BR1 496 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 OTUB1Q96FW1 271 aaPredicted RBP12.27□□□□□ -0.45
SMAD1-215ENST00000515385 SERPINB11Q96P15 392 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 ERMAPQ96PL5 475 aaPredicted RBP12.27□□□□□ -0.45
SMAD1-215ENST00000515385 FAM126AQ9BYI3 521 aaPredicted RBP12.27□□□□□ -0.45
SMAD1-215ENST00000515385 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.27□□□□□ -0.45
SMAD1-215ENST00000515385 ACPTQ9BZG2 426 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 PITHD1Q9GZP4 211 aaPredicted RBP12.27□□□□□ -0.45
SMAD1-215ENST00000515385 COMMD3Q9UBI1 195 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 TMEM5Q9Y2B1 443 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 KCNMB2Q9Y691 235 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 EVPLQ92817 2033 aa12.27□□□□□ -0.45
SMAD1-215ENST00000515385 MYBPHLA2RUH7 354 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 MFSD2BA6NFX1 497 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 LDOC1O95751 146 aaPredicted RBP12.26□□□□□ -0.45
SMAD1-215ENST00000515385 LGALS2P05162 132 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 PEPDP12955 493 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 EPB42P16452 691 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 AKAP5P24588 427 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 IRS1P35568 1242 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 RGS4P49798 205 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 CLCN7P51798 805 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 SOX4Q06945 474 aaPredicted RBP12.26□□□□□ -0.45
SMAD1-215ENST00000515385 IRF5Q13568 498 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 CDH18Q13634 790 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 METTL11BQ5VVY1 283 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 RETSATQ6NUM9 610 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 QSOX2Q6ZRP7 698 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 USP30Q70CQ3 517 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 C11orf65Q8NCR3 313 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 OR11H4Q8NGC9 324 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 CDC26Q8NHZ8 85 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 RIT1Q92963 219 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 PSMG2Q969U7 264 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 TSSK3Q96PN8 268 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 ZYG11BQ9C0D3 744 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 SDHAF2Q9NX18 166 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 WWOXQ9NZC7 414 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 SCP2D1Q9UJQ7 156 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 PCDHB1Q9Y5F3 818 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 ACTL7AQ9Y615 435 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 PDCD11Q14690 1871 aaKnown RBP12.26□□□□□ -0.45
SMAD1-215ENST00000515385 THSD7AQ9UPZ6 1657 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 TRAV6A0A075B6T7 132 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 M0R129 80 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 WWP2O00308 870 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 CASC3O15234 703 aaKnown RBP12.26□□□□□ -0.45
SMAD1-215ENST00000515385 SCN2BO60939 215 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 CLDN9O95484 217 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 MPC2O95563 127 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 PROS1P07225 676 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 MMP10P09238 476 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 HAPLN1P10915 354 aaPredicted RBP12.26□□□□□ -0.45
SMAD1-215ENST00000515385 SDC1P18827 310 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 LIMS1P48059 325 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 GPR176Q14439 515 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 TTLL4Q14679 1199 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 OCLNQ16625 522 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 DUSP6Q16828 381 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 SPIN4Q56A73 249 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 DGKKQ5KSL6 1271 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 RGMBQ6NW40 437 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 GLT6D1Q7Z4J2 308 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 MS4A15Q8N5U1 240 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 OR11H7Q8NGC8 314 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 COPS5Q92905 334 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 WBP1Q96G27 269 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 PIP5K1AQ99755 562 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 DPH2Q9BQC3 489 aaPredicted RBP12.26□□□□□ -0.45
SMAD1-215ENST00000515385 REG4Q9BYZ8 158 aa12.26□□□□□ -0.45
SMAD1-215ENST00000515385 CHST8Q9H2A9 424 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms