RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FAM212BQ9NTI7 297 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P3-201ENST00000502802 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P3-201ENST00000502802 CLIP2Q9UDT6 1046 aa4.68□□□□□ -1.66
HMGB1P3-201ENST00000502802 DISP3Q9P2K9 1392 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 PCSK5Q92824 1860 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 CDC42BPAQ5VT25 1732 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 A0A0G2JLW4 131 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 MSGN1A6NI15 193 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 P2RY10O00398 339 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 LRP3O75074 770 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 PEX11AO75192 247 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 NADKO95544 446 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 DIRAS3O95661 229 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 CLPTM1O96005 669 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 FUT1P19526 365 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 PKLRP30613 574 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 ACAA2P42765 397 aaKnown RBP4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 CCR4P51679 360 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 GEMP55040 296 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 FOXG1P55316 489 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 CCDC6Q16204 474 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 GTDC1Q4AE62 458 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 C9orf50Q5SZB4 431 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 SLC35E4Q6ICL7 350 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 SH2D5Q6ZV89 423 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 SAMD14Q8IZD0 417 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 ELMOD1Q8N336 334 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 RNF148Q8N7C7 305 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 OR4L1Q8NH43 312 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 SMPDL3AQ92484 453 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 RAB39BQ96DA2 213 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 LURAP1Q96LR2 239 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 CTAGE1Q96RT6 745 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 AGPAT1Q99943 283 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 TDRD1Q9BXT4 1180 aaKnown RBP4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 ECT2Q9H8V3 914 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 MAN2C1Q9NTJ4 1040 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 SLC35D1Q9NTN3 355 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 ZNF319Q9P2F9 582 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 ANKMY1Q9P2S6 941 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 EPHA6Q9UF33 1036 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 OR1A2Q9Y585 309 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 SELENOKQ9Y6D0 94 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 ZFYVE16Q7Z3T8 1539 aa4.67□□□□□ -1.66
HMGB1P3-201ENST00000502802 PLCH2O75038 1416 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 NCAPD2Q15021 1401 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 FMN1Q68DA7 1419 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 YEATS2Q9ULM3 1422 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 FAM172BPA6NC97 362 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 NKX6-3A6NJ46 265 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 F8WDY8 70 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 P2RX6O15547 441 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 ECE2O60344 883 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 TRMUO75648 421 aaKnown RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 TXNDC12O95881 172 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 PRSS1P07477 247 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 CEACAM1P13688 526 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 PRDX6P30041 224 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 NUMBP49757 651 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 CCL11P51671 97 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 ERVFC1-1P60608 527 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 GABPB1Q06547 395 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 MFGE8Q08431 387 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 SCGB2A2Q13296 93 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 MEF2DQ14814 521 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 TRADDQ15628 312 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 ZNF672Q499Z4 452 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 CMPK2Q5EBM0 449 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 HIST2H2AA3Q6FI13 130 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 CDHR3Q6ZTQ4 885 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 TMEM26Q6ZUK4 368 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 SLC26A9Q7LBE3 791 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 TRMT1LQ7Z2T5 733 aaKnown RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 ADGRD2Q7Z7M1 963 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 CCDC197Q8NCU1 140 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 FAM71CQ8NEG0 241 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 OR6M1Q8NGM8 313 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 OR10G8Q8NGN5 311 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 DQX1Q8TE96 717 aaKnown RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 OMA1Q96E52 524 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 MRPL53Q96EL3 112 aaKnown RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 ZNF274Q96GC6 653 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 RPGRIP1Q96KN7 1286 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 CXorf58Q96LI9 332 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 NECTIN4Q96NY8 510 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 FUNDC2Q9BWH2 189 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 NMNAT2Q9BZQ4 307 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 CCSER1Q9C0I3 900 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 TMEM231Q9H6L2 316 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 ZNF624Q9P2J8 865 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 STK36Q9NRP7 1315 aa4.66□□□□□ -1.66
HMGB1P3-201ENST00000502802 PCF11O94913 1555 aaKnown RBP4.65□□□□□ -1.66
HMGB1P3-201ENST00000502802 PREX2Q70Z35 1606 aa4.65□□□□□ -1.66
HMGB1P3-201ENST00000502802 SCAPERQ9BY12 1400 aa4.65□□□□□ -1.66
HMGB1P3-201ENST00000502802 ITSN2Q9NZM3 1697 aa4.65□□□□□ -1.66
HMGB1P3-201ENST00000502802 TMEM89A2RUT3 159 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 SRRM4A7MD48 611 aaKnown RBP4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 SLC1A7O00341 560 aa4.65□□□□□ -1.67
HMGB1P3-201ENST00000502802 CCSO14618 274 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms