RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 PP2D1A8MPX8 630 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 C2CD4DB7Z1M9 353 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 FAM86B1E9PN63 330 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 PI4K2BG5E9Z4 385 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 SLC37A4O43826 429 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 FLOT1O75955 427 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 REC8O95072 547 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 ATP1B1P05026 303 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 FAM86B2P0C5J1 330 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 PRKAR1AP10644 381 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 VCANP13611 3396 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 IFNAR1P17181 557 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 SYT1P21579 422 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 GJB2P29033 226 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 CCND3P30281 292 aaPredicted RBP3.06□□□□□ -1.92
CD46-217ENST00000493796 MC5RP33032 325 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 SOX3P41225 446 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 LIMK1P53667 647 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 CSE1LP55060 971 aaKnown RBP3.06□□□□□ -1.92
CD46-217ENST00000493796 CLDN15P56746 228 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 FKBP1BP68106 108 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 RALGDSQ12967 914 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 ITGB3BPQ13352 177 aaPredicted RBP3.06□□□□□ -1.92
CD46-217ENST00000493796 CDH18Q13634 790 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 COL4A6Q14031 1691 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 TRIM29Q14134 588 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 COG2Q14746 738 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 GPNMBQ14956 572 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 TAB1Q15750 504 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 CDC37Q16543 378 aaPredicted RBP3.06□□□□□ -1.92
CD46-217ENST00000493796 USH1GQ495M9 461 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 C9orf152Q5JTZ5 239 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 CFAP58Q5T655 872 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 CES4AQ5XG92 561 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 NOTUMQ6P988 496 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 SUSD1Q6UWL2 747 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 NME8Q8N427 588 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 RASGEF1AQ8N9B8 481 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 TDRD5Q8NAT2 981 aaKnown RBP3.06□□□□□ -1.92
CD46-217ENST00000493796 NOA1Q8NC60 698 aaKnown RBP3.06□□□□□ -1.92
CD46-217ENST00000493796 WDR19Q8NEZ3 1342 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 MIPOL1Q8TD10 442 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 ESR2Q92731 530 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 FOXN4Q96NZ1 517 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 AGAP4Q96P64 663 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 SPZ1Q9BXG8 430 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 NACAP1Q9BZK3 213 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 KRT23Q9C075 422 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 HOXD1Q9GZZ0 328 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 CYP39A1Q9NYL5 469 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 TMOD2Q9NZR1 351 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 CTNNA3Q9UI47 895 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 SCN10AQ9Y5Y9 1956 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 A0A0C4DFX4 3053 aa3.06□□□□□ -1.92
CD46-217ENST00000493796 FRMPD4Q14CM0 1322 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 LOC105371242A0A075B767 164 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 C19orf81C9J6K1 198 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 CLDN4O14493 209 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 WDR46O15213 610 aaKnown RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 TADA2AO75478 443 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 SRSF10O75494 262 aaKnown RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 ATP6AP2O75787 350 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 CEACAM4O75871 244 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 TDP2O95551 362 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 CCNE2O96020 404 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 CAPN2P17655 700 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 CYP2B6P20813 491 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 SLC1A4P43007 532 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 RPS6P62753 249 aaKnown RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 IRX4P78413 519 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 PAX8Q06710 450 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 GRB14Q14449 540 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 TMEM132DQ14C87 1099 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 PTPN14Q15678 1187 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 UGCGQ16739 394 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 ERMARDQ5T6L9 678 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 SNRNP48Q6IEG0 339 aaKnown RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 PLPPR4Q7Z2D5 763 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 GPR142Q7Z601 462 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 CDC20BQ86Y33 519 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 RYBPQ8N488 228 aaPredicted RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 FAM89BQ8N5H3 189 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 SLC4A11Q8NBS3 891 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 OR5T2Q8NGG2 359 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 C11orf45Q8TAV5 145 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 PIK3R3Q92569 461 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 SECISBP2LQ93073 1101 aaKnown RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 OTUB1Q96FW1 271 aaPredicted RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 FAM218AQ96MZ4 157 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 LRRC3BQ96PB8 259 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 SOSTQ9BQB4 213 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 SLF1Q9BQI6 1058 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 OVOL2Q9BRP0 275 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 TDRD1Q9BXT4 1180 aaKnown RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 TRIM6Q9C030 488 aaPredicted RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 CXCL16Q9H2A7 254 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 CCDC177Q9NQR7 707 aaPredicted RBP3.05□□□□□ -1.92
CD46-217ENST00000493796 GSN-AS1Q9NRJ2 163 aa3.05□□□□□ -1.92
CD46-217ENST00000493796 WIPI2Q9Y4P8 454 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms