RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 UPK3BL2E5RIL1 263 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 STK16O75716 305 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 SLC22A5O76082 557 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 ACRP10323 421 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 PIPP12273 146 aaPredicted RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 CSF2RAP15509 400 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 BPIP17213 487 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 ITGALP20701 1170 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 HNF1BP35680 557 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 DOC2BQ14184 412 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 SPHARQ15513 63 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 MICAQ29983 383 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 ZNF648Q5T619 568 aaPredicted RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 FAM122CQ6P4D5 195 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 HSDL2Q6YN16 418 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 DDX53Q86TM3 631 aaKnown RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 APCDD1Q8J025 514 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 CLDN22Q8N7P3 220 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 ADAMTS19Q8TE59 1207 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 SKA2Q8WVK7 121 aaPredicted RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 ZNF689Q96CS4 500 aaPredicted RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 TRMT61AQ96FX7 289 aaKnown RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 TRMT2BQ96GJ1 504 aaKnown RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 ZSCAN5AQ9BUG6 496 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 MCUBQ9NWR8 336 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 NDUFAF4Q9P032 175 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 SH3BP4Q9P0V3 963 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 FBXO9Q9UK97 447 aaPredicted RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 WASHC1A8K0Z3 465 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 HCN1O60741 890 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 TNFRSF21O75509 655 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 CDRT1O95170 752 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 IL1AP01583 271 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 ACRV1P26436 265 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 MAPK1P28482 360 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 CYP4F8P98187 520 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 MXD1Q05195 221 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 PTGES3Q15185 160 aaKnown RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 GPRC6AQ5T6X5 926 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 PTCHD4Q6ZW05 846 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 TSPAN33Q86UF1 283 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 FAM217AQ8IXS0 508 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 SYNPOQ8N3V7 929 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 RNF175Q8N4F7 328 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 OR9Q1Q8NGQ5 310 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 SPPL2AQ8TCT8 520 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 SELENOMQ8WWX9 145 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 TOX2Q96NM4 488 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 HHIPQ96QV1 700 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 SLC29A3Q9BZD2 475 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 ENOPH1Q9UHY7 261 aa13.59□□□□□ -0.23
RER1-207ENST00000488353 KIAA0100Q14667 2235 aaKnown RBP13.59□□□□□ -0.23
RER1-207ENST00000488353 GLYATL1P3A0A0U1RQE8 302 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 PRR23AA6NEV1 266 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 TRIM77I1YAP6 450 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 BNIP3LO60238 219 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 CLDN9O95484 217 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 PRKAR1AP10644 381 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 SDC1P18827 310 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 IL32P24001 234 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 EPHB3P54753 998 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 MTAPQ13126 283 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 RAB33AQ14088 237 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 LGI4Q8N135 537 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 C9orf62Q8N4C0 152 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 OR52J3Q8NH60 311 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 QRFPRQ96P65 431 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 HTATIP2Q9BUP3 242 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 RETREG1Q9H6L5 497 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 NDUFB11Q9NX14 153 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 ARL15Q9NXU5 204 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 SLC6A14Q9UN76 642 aa13.58□□□□□ -0.23
RER1-207ENST00000488353 LSM2Q9Y333 95 aaKnown RBP13.58□□□□□ -0.23
RER1-207ENST00000488353 FAM240BA0A1B0GVZ2 78 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 SMLR1H3BR10 107 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 I3L521 148 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 AGRPO00253 132 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 BTN3A3O00478 584 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 NRG2O14511 850 aaPredicted RBP13.58□□□□□ -0.24
RER1-207ENST00000488353 ORC5O43913 435 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 TSC22D2O75157 780 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 RFPL3O75679 317 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 HLA-DQB1P01920 261 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 GJA1P17302 382 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 TNNI3P19429 210 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
RER1-207ENST00000488353 RPIAP49247 311 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 CRYBA2P53672 197 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 PER3P56645 1201 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 CLDN20P56880 219 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 BCL2L1Q07817 233 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 IKZF1Q13422 519 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 CDH18Q13634 790 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 MFSD13AQ14CX5 517 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 WSCD2Q2TBF2 565 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 TRIQKQ629K1 86 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 METTL2BQ6P1Q9 378 aaKnown RBP13.58□□□□□ -0.24
RER1-207ENST00000488353 HDDC2Q7Z4H3 204 aa13.58□□□□□ -0.24
RER1-207ENST00000488353 TSEN54Q7Z6J9 526 aaKnown RBP13.58□□□□□ -0.24
RER1-207ENST00000488353 OR4C15Q8NGM1 316 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms