RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ABHD14A-ACY1A0A1B0GW23 586 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 TAPBPO15533 448 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 PCDHGA12O60330 932 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 GUCY1B2O75343 617 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 TULP3O75386 442 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 REM1O75628 298 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 SCELO95171 688 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 ETHE1O95571 254 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 RPS17P08708 135 aaKnown RBP4.78□□□□□ -1.65
CCDC39-204ENST00000476379 BMPR1AP36894 532 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 PIK3CBP42338 1070 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 SLC15A1P46059 708 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 COX10Q12887 443 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 GPR17Q13304 367 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 BCL7AQ4VC05 210 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 DMRTC1Q5HYR2 192 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 RAB41Q5JT25 222 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 DCST1Q5T197 706 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 CCNJQ5T5M9 372 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 KIAA1614Q5VZ46 1190 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 PLET1Q6UQ28 207 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 SBSNQ6UWP8 590 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 BHLHA9Q7RTU4 235 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 HSD11B1LQ7Z5J1 315 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 LRRTM4Q86VH4 590 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 TDHQ8IZJ6 230 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 OR51G2Q8NGK0 314 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.78□□□□□ -1.65
CCDC39-204ENST00000476379 GPR151Q8TDV0 419 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 NKD1Q969G9 470 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 ORAI1Q96D31 301 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 NEDD4LQ96PU5 975 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF382Q96SR6 550 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 TMEM246Q9BRR3 403 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 GPR174Q9BXC1 333 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 ASPNQ9BXN1 380 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 SP140LQ9H930 580 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 PRDM16Q9HAZ2 1276 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 THG1LQ9NWX6 298 aaKnown RBP4.78□□□□□ -1.65
CCDC39-204ENST00000476379 SIRT5Q9NXA8 310 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 ZIM2Q9NZV7 527 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 NLKQ9UBE8 527 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 ATXN7L1Q9ULK2 861 aaPredicted RBP4.78□□□□□ -1.65
CCDC39-204ENST00000476379 PPT2Q9UMR5 302 aa4.78□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF638Q14966 1978 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3DA0A087WVF3 549 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3IA0A087WXS9 549 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3EA0A087X179 549 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3KA0A087X1G2 549 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ZC3H12DA2A288 527 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3FA6NER0 549 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OR2W5A6NFC9 320 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 LRRC72A6NJI9 287 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 GABRR3A8MPY1 467 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 A8MUA0 341 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3LB9A6J9 549 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ERI3O43414 337 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 KDELR3O43731 214 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 POP7O75817 140 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3HP0C7X1 549 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CYP2A6P11509 494 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ATP1B2P14415 290 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 FOSL2P15408 326 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SPNP16150 400 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 PSMA1P25786 263 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 DNAJA1P31689 397 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 IFNA8P32881 189 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CSTF2P33240 577 aaKnown RBP eCLIP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 IL12RB1P42701 662 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 MAPKAPK2P49137 400 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF140P52738 457 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 UGT2B15P54855 530 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBPL1P62380 186 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 HBA1P69905 142 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 APOFQ13790 326 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 RFTN1Q14699 578 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3GQ6DHY5 549 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3CQ6IPX1 549 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SLC30A6Q6NXT4 461 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 C11orf88Q6PI97 169 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 GAREM2Q75VX8 874 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 LIMS2Q7Z4I7 341 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 NRARPQ7Z6K4 114 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ABI3BPQ7Z7G0 1075 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CDH24Q86UP0 819 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 CCDC71Q8IV32 467 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SLC30A8Q8IWU4 369 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 TBC1D3Q8IZP1 549 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OR5AR1Q8NGP9 310 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 OR14C36Q8NHC7 312 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 MYDGFQ969H8 173 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 SIPA1Q96FS4 1042 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 LMLNQ96KR4 655 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 C12orf66Q96MD2 445 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 MGLLQ99685 303 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 MTIF3Q9H2K0 278 aaKnown RBP4.77□□□□□ -1.65
CCDC39-204ENST00000476379 STARD5Q9NSY2 213 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 NLGN3Q9NZ94 848 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 ZNF232Q9UNY5 417 aa4.77□□□□□ -1.65
CCDC39-204ENST00000476379 MGAT4BQ9UQ53 548 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms