RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ZDHHC11Q9H8X9 412 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 PRDM7Q9NQW5 492 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 MTO1Q9Y2Z2 717 aaKnown RBP21.13■□□□□ 0.97
USP42-205ENST00000465073 PINLYPA6NC86 204 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 FOXO6A8MYZ6 492 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 CCDC188H7C350 402 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 WWP2O00308 870 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 CCDC166P0CW27 439 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 HSPA7P48741 367 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 ATP6V0D1P61421 351 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 SERTAD2Q14140 314 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 TESK1Q15569 626 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 HIST2H2ACQ16777 129 aaPredicted RBP21.13■□□□□ 0.97
USP42-205ENST00000465073 PAGE2BQ5JRK9 111 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 NDUFAF5Q5TEU4 345 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 HIST2H2AA3Q6FI13 130 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 ADNP2Q6IQ32 1131 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 RTL4Q6ZR62 310 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 GK5Q6ZS86 529 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 ACAD11Q709F0 780 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 SLC22A16Q86VW1 577 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 C7orf57Q8NEG2 295 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 CAB39LQ9H9S4 337 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 KCNJ16Q9NPI9 418 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 SMYD2Q9NRG4 433 aa21.13■□□□□ 0.97
USP42-205ENST00000465073 C2CD3Q4AC94 2353 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 FAM166BA8MTA8 275 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 TNNI3P19429 210 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 CNR1P21554 472 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 HK2P52789 917 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 PMPCAQ10713 525 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 GXYLT1Q4G148 440 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 OR5L2Q8NGL0 311 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 CDKL2Q92772 493 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 SGCZQ96LD1 299 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 FAM173AQ9BQD7 235 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 TBCDQ9BTW9 1192 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 TTTY12Q9BZ98 90 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 OR8D2Q9GZM6 311 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 CD274Q9NZQ7 290 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 TXNDC16Q9P2K2 825 aa21.12■□□□□ 0.97
USP42-205ENST00000465073 PTBP2Q9UKA9 531 aaKnown RBP21.12■□□□□ 0.97
USP42-205ENST00000465073 MYOCOSA0A1B0GUC4 107 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 OR14I1A6ND48 311 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 PIAS1O75925 651 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 TOXO94900 526 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 GLSO94925 669 aaPredicted RBP21.11■□□□□ 0.97
USP42-205ENST00000465073 CD1DP15813 335 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 CD22P20273 847 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 RPL21P46778 160 aaKnown RBP21.11■□□□□ 0.97
USP42-205ENST00000465073 IRF8Q02556 426 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 TFF3Q07654 80 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 OR4D1Q15615 310 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 TBCCQ15814 346 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 FBXO48Q5FWF7 155 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 SPNS3Q6ZMD2 512 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 GOLM1Q8NBJ4 401 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 PDPRQ8NCN5 879 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 BBOF1Q8ND07 529 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 PYROXD1Q8WU10 500 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 ESAMQ96AP7 390 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 NPDC1Q9NQX5 325 aaPredicted RBP21.11■□□□□ 0.97
USP42-205ENST00000465073 SAR1BQ9Y6B6 198 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 SPACA6W5XKT8 324 aa21.11■□□□□ 0.97
USP42-205ENST00000465073 A0A0G2JMM0 328 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 A0A1W2PPB8 328 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 A0A1W2PRS3 328 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 NKX2-6A6NCS4 301 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 FAM90A27PA6NNH2 459 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 KIR3DP1A8MWS1 328 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 C17orf105B2RV13 164 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 NPIPA2E9PIF3 369 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 NPIPA3F8WFD2 350 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 PHGDHO43175 533 aaKnown RBP21.1■□□□□ 0.97
USP42-205ENST00000465073 STMN1P16949 149 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 CASP2P42575 452 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 NR0B1P51843 470 aaKnown RBP21.1■□□□□ 0.97
USP42-205ENST00000465073 RNF4P78317 190 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 ZNF750Q32MQ0 723 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 TMEM35AQ53FP2 167 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 OPN5Q6U736 354 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 CAPN12Q6ZSI9 719 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 UBE3DQ7Z6J8 389 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 CCDC71Q8IV32 467 aaPredicted RBP21.1■□□□□ 0.97
USP42-205ENST00000465073 RPRMLQ8N4K4 120 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 SLC2A12Q8TD20 617 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 SCYL1Q96KG9 808 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 GPR22Q99680 433 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 CPNE1Q99829 537 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 UCK2Q9BZX2 261 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 IL1RL2Q9HB29 575 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 SNX24Q9Y343 169 aa21.1■□□□□ 0.97
USP42-205ENST00000465073 CXorf49A8MYA2 514 aaPredicted RBP21.09■□□□□ 0.97
USP42-205ENST00000465073 BCKDKO14874 412 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 IGHG3P01860 377 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 EPORP19235 508 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 ATP5A1P25705 553 aaKnown RBP21.09■□□□□ 0.97
USP42-205ENST00000465073 MSX1P28360 303 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 PAFAH1B1P43034 410 aa21.09■□□□□ 0.97
USP42-205ENST00000465073 NUP107P57740 925 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms