RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 IL17CQ9P0M4 197 aa14.82□□□□□ -0.04
SSR4-206ENST00000460616 CORO2BQ9UQ03 480 aa14.82□□□□□ -0.04
SSR4-206ENST00000460616 SNX11Q9Y5W9 270 aa14.82□□□□□ -0.04
SSR4-206ENST00000460616 PCM1Q15154 2024 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 PRAMEF25A6NGN4 478 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 I3L521 148 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 BTN3A3O00478 584 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 LYRM1O43325 122 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 PRMT3O60678 531 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 RFPL3O75679 317 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 ACPPP15309 386 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 TNNI3P19429 210 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 SDC2P34741 201 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 CLDN20P56880 219 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 MLLT11Q13015 90 aaPredicted RBP14.81□□□□□ -0.04
SSR4-206ENST00000460616 NFE2L1Q14494 772 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 ZNF628Q5EBL2 1059 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 C10orf120Q5SQS8 335 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 GPRC6AQ5T6X5 926 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 FAM151BQ6UXP7 276 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 ZNF782Q6ZMW2 699 aaPredicted RBP14.81□□□□□ -0.04
SSR4-206ENST00000460616 TMCO2Q7Z6W1 182 aaPredicted RBP14.81□□□□□ -0.04
SSR4-206ENST00000460616 ABI3BPQ7Z7G0 1075 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 RNF175Q8N4F7 328 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 SLC37A3Q8NCC5 494 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 MTERF3Q96E29 417 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 DUSP26Q9BV47 211 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 GPR63Q9BZJ6 419 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 GALNT9Q9HCQ5 603 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 FZD3Q9NPG1 666 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 ARL15Q9NXU5 204 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 STOML2Q9UJZ1 356 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 DNMT3AQ9Y6K1 912 aaPredicted RBP14.81□□□□□ -0.04
SSR4-206ENST00000460616 KCNE1BA0A087WTH5 132 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 SMIM30A4D0T7 59 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 SLC43A1O75387 559 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 HLA-DQB1P01920 261 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 TACR2P21452 398 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 PPIBP23284 216 aaKnown RBP14.81□□□□□ -0.04
SSR4-206ENST00000460616 RPIAP49247 311 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 GATMP50440 423 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 PER3P56645 1201 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 BOP1Q14137 746 aaKnown RBP14.81□□□□□ -0.04
SSR4-206ENST00000460616 TEX261Q6UWH6 196 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 ANGPTL8Q6UXH0 198 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.81□□□□□ -0.04
SSR4-206ENST00000460616 ZNF598Q86UK7 904 aaKnown RBP14.81□□□□□ -0.04
SSR4-206ENST00000460616 RBFAQ8N0V3 343 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 PROKR2Q8NFJ6 384 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 DNAJC27Q9NZQ0 273 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 PCDHGB7Q9Y5F8 929 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 U3KQ87 197 aa14.81□□□□□ -0.04
SSR4-206ENST00000460616 NUP214P35658 2090 aaPredicted RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 TLR4O00206 839 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 GADD45GO95257 159 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 CHRM5P08912 532 aaPredicted RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 FAM157BP0CG42 384 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 WEE1P30291 646 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 CRATP43155 626 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 CASP9P55211 416 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 ABATP80404 500 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 SUZ12Q15022 739 aaKnown RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 SLC24A5Q71RS6 500 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 MRPL10Q7Z7H8 261 aaKnown RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 LAS2Q8IYD9 372 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 TOR1AIP2Q8NFQ8 470 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 AP3S1Q92572 193 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 AKAP1Q92667 903 aaKnown RBP eCLIP14.8□□□□□ -0.04
SSR4-206ENST00000460616 EID2BQ96D98 161 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 FAM193BQ96PV7 902 aaPredicted RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 NELL2Q99435 816 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 PIP5K1AQ99755 562 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 PPIL3Q9H2H8 161 aaKnown RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 C11orf16Q9NQ32 467 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 THSD1Q9NS62 852 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 COMMD3Q9UBI1 195 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 ELF5Q9UKW6 265 aaPredicted RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 KCNE2Q9Y6J6 123 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 CEP290O15078 2479 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 C1orf226A1L170 272 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 KDELR3O43731 214 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 ZNF623O75123 536 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 PRAMEF12O95522 483 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 TRBC1P01850 177 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 F11P03951 625 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 HMGA2P52926 109 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 GANABQ14697 944 aaKnown RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 GGTA1PQ4G0N0 100 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 FRG2Q64ET8 278 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 PAQR6Q6TCH4 344 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 USP30Q70CQ3 517 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 PDZD3Q86UT5 571 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 C1orf52Q8N6N3 182 aaKnown RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 VPS37AQ8NEZ2 397 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 KCTD7Q96MP8 289 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 FRG2BQ96QU4 278 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 MALT1Q9UDY8 824 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 AFF4Q9UHB7 1163 aaKnown RBP14.8□□□□□ -0.04
SSR4-206ENST00000460616 AUP1Q9Y679 476 aa14.8□□□□□ -0.04
SSR4-206ENST00000460616 RANBP2P49792 3224 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms