RNA–Protein interactions for RNA: ENST00000455372.2

SLC39A3-202, Transcript of solute carrier family 39 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC39A3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-202ENST00000455372 REEP5Q00765 189 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 AGBL4Q5VU57 503 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 SAXO2Q658L1 398 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 REEP3Q6NUK4 255 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 IGFN1Q86VF2 1251 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 LINC01555Q8NAE3 123 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 SNRNP27Q8WVK2 155 aaKnown RBP17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 NEURL3Q96EH8 262 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 PDXPQ96GD0 296 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 RSPO3Q9BXY4 272 aaPredicted RBP17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 ZNF226Q9NYT6 803 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 WDR37Q9Y2I8 494 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 SNX11Q9Y5W9 270 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 ENPP4Q9Y6X5 453 aa17.41■□□□□ 0.38
SLC39A3-202ENST00000455372 REV3LO60673 3130 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 UNC80Q8N2C7 3258 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 CAPN5O15484 640 aaPredicted RBP17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 PDPK1O15530 556 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 B4GALT2O60909 372 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 RPN2P04844 631 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 GJA4P35212 333 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 NUDT6P53370 316 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 GPM6BQ13491 265 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 PUM1Q14671 1186 aaKnown RBP eCLIP17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 UBE2UQ5VVX9 321 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 PLD3Q8IV08 490 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 DNAJC22Q8N4W6 341 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 SLC38A5Q8WUX1 472 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 SMPDL3AQ92484 453 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 CHFRQ96EP1 664 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 PLCXD1Q9NUJ7 323 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 WBP1LQ9NX94 342 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 SERGEFQ9UGK8 458 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 PNMA8BQ9ULN7 279 aaPredicted RBP17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 PMF1-BGLAPU3KQ54 211 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 M0R129 80 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 TMPRSS11DO60235 418 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 BCHEP06276 602 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 CA3P07451 260 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 ZNF12P17014 697 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 CXCR2P25025 360 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 TGFBR1P36897 503 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 HSPB3Q12988 150 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 VITQ6UXI7 678 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 DCDC5Q6ZRR9 648 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 UTP15Q8TED0 518 aaKnown RBP17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 OR5P2Q8WZ92 322 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 GTPBP3Q969Y2 492 aaKnown RBP17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 SPATA7Q9P0W8 599 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 SLC6A14Q9UN76 642 aa17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 FAM32AQ9Y421 112 aaKnown RBP17.4■□□□□ 0.38
SLC39A3-202ENST00000455372 KAT7O95251 611 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 GADD45GO95257 159 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 FUCA1P04066 466 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 SLC35G4P0C7Q5 338 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 CD36P16671 472 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 GABRB1P18505 474 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 HMGA2P52926 109 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 FAM46CQ5VWP2 391 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 FAM109BQ6ICB4 259 aaPredicted RBP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 SLC44A2Q8IWA5 706 aaPredicted RBP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 AMER3Q8N944 861 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 GGHQ92820 318 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 UCN3Q969E3 161 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 TEX10Q9NXF1 929 aaPredicted RBP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 RANBP2P49792 3224 aaKnown RBP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 LATO43561 262 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 NADKO95544 446 aaPredicted RBP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 HSD17B2P37059 387 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 OCA2Q04671 838 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 ITGADQ13349 1161 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 HEPACAMQ14CZ8 416 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 MLIPQ5VWP3 458 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 TMEM236Q5W0B7 351 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 PAGE2Q7Z2X7 111 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 UBE3DQ7Z6J8 389 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 TMCO5AQ8N6Q1 288 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 DYNC2LI1Q8TCX1 351 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 APOBEC4Q8WW27 367 aaKnown RBP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 RAB8BQ92930 207 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 EXOSC8Q96B26 276 aaKnown RBP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 CERS4Q9HA82 394 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 SIRT3Q9NTG7 399 aaPredicted RBP17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 TBCCD1Q9NVR7 557 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 HCN4Q9Y3Q4 1203 aa17.39■□□□□ 0.37
SLC39A3-202ENST00000455372 A8MVJ9 347 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 CLDN25C9JDP6 229 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 FFAR1O14842 300 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 KMOO15229 486 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 OR1F1O43749 312 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 LCMT2O60294 686 aaKnown RBP17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 IFNW1P05000 195 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 RHCEP18577 417 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 LIPAP38571 399 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 PSMD7P51665 324 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 LIM2P55344 173 aa17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 PCBP4P57723 403 aaKnown RBP17.38■□□□□ 0.37
SLC39A3-202ENST00000455372 SYT16Q17RD7 645 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms