RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 NEDD4LQ96PU5 975 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 PCDHB18PQ96TA0 734 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 TDRD1Q9BXT4 1180 aaKnown RBP4.16□□□□□ -1.74
LINC00440-201ENST00000446579 EGLN1Q9GZT9 426 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 FNDC4Q9H6D8 234 aaPredicted RBP4.16□□□□□ -1.74
LINC00440-201ENST00000446579 ATP13A3Q9H7F0 1226 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 ZNF665Q9H7R5 613 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 NDUFA13Q9P0J0 144 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 POLKQ9UBT6 870 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 IL20RAQ9UHF4 553 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 PPP2R2CQ9Y2T4 447 aa4.16□□□□□ -1.74
LINC00440-201ENST00000446579 TRBV4-1A0A0J9YWV2 114 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 A0A1B0GWJ7 208 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 CLRN2A0PK11 232 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 GPR89AB7ZAQ6 455 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 H0YCG3 227 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 CCSO14618 274 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 KHDRBS3O75525 346 aaKnown RBP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 PALMO75781 387 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 KRT36O76013 467 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 IGKV3-20P01619 116 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 ATP1A1P05023 1023 aaKnown RBP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 APRTP07741 180 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 GPR89BP0CG08 455 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 FAM157CP0CG43 387 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 TSPY4P0CV99 314 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 TSPY10P0CW01 314 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 ERVK-10P10266 1014 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 PRG2P13727 222 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 NCF1P14598 390 aaPredicted RBP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 AADACP22760 399 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 CTNNA2P26232 953 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 PRDX6P30041 224 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 PEX19P40855 299 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 ALDH3B1P43353 468 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 MAGEA4P43358 317 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 SLC6A8P48029 635 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 HNMTP50135 292 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 KIAA1644Q3SXP7 199 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 ZNF672Q499Z4 452 aaPredicted RBP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 LRRC37A5PQ49AS3 106 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 GFI1BQ5VTD9 330 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 C19orf48Q6RUI8 117 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 ARSKQ6UWY0 536 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 TRMT1LQ7Z2T5 733 aaKnown RBP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 STPG4Q8N801 248 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 COLGALT1Q8NBJ5 622 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 GMCL1P1Q8NEA9 526 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 OR6M1Q8NGM8 313 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 OR4L1Q8NH43 312 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 NR4A3Q92570 626 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 P3H4Q92791 437 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 IL12RB2Q99665 862 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 AGPAT1Q99943 283 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 CBWD1Q9BRT8 395 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 CRACR2AQ9BSW2 395 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 THUMPD2Q9BTF0 503 aaKnown RBP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 NT5C3AQ9H0P0 336 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 TMEM231Q9H6L2 316 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 COQ10BQ9H8M1 238 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 MAN2C1Q9NTJ4 1040 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 PLEK2Q9NYT0 353 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 ZNF319Q9P2F9 582 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 DBF4Q9UBU7 674 aaPredicted RBP4.15□□□□□ -1.75
LINC00440-201ENST00000446579 COPS7AQ9UBW8 275 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 CLIP2Q9UDT6 1046 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 HPCAL4Q9UM19 191 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 WDR37Q9Y2I8 494 aa4.15□□□□□ -1.75
LINC00440-201ENST00000446579 LMO7DNF2Z398 122 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 RIPK2O43353 540 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 GMFGO60234 142 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 CIDEAO60543 219 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 TSC22D2O75157 780 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 ZNF432O94892 652 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 SNX4O95219 450 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 SYNGR4O95473 234 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 AK1P00568 194 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 KRT8P05787 483 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 F7P08709 466 aaPredicted RBP4.14□□□□□ -1.75
LINC00440-201ENST00000446579 RALAP11233 206 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 RPL35AP18077 110 aaKnown RBP4.14□□□□□ -1.75
LINC00440-201ENST00000446579 GLRA1P23415 457 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 TDO2P48775 406 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 GEMP55040 296 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 PMP22Q01453 160 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 GABPB1Q06547 395 aaPredicted RBP4.14□□□□□ -1.75
LINC00440-201ENST00000446579 ARL16Q0P5N6 197 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 FUT7Q11130 342 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 DRP2Q13474 957 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 SNX1Q13596 522 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 ZNF718Q3SXZ3 478 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 FAM106AQ4KMX7 169 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 MPPE1Q53F39 396 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 HIST2H2AA3Q6FI13 130 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 CAPN13Q6MZZ7 669 aaPredicted RBP4.14□□□□□ -1.75
LINC00440-201ENST00000446579 TMEM64Q6YI46 380 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 SMIM29Q86T20 159 aa4.14□□□□□ -1.75
LINC00440-201ENST00000446579 SLC22A16Q86VW1 577 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms