RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 ARL1P40616 181 aaPredicted RBP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 RAP1GDS1P52306 607 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 ZNF33BQ06732 778 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 MEP1AQ16819 746 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 MRM1Q6IN84 353 aaKnown RBP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 RPUSD3Q6P087 351 aaKnown RBP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 LETMD1Q6P1Q0 360 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 CLNKQ7Z7G1 428 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 SLC22A9Q8IVM8 553 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 APCDD1LQ8NCL9 501 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 OR1N1Q8NGS0 311 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 OR2W6PQ8NHA6 318 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 ANKRD9Q96BM1 317 aaPredicted RBP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 TMEM237Q96Q45 408 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 CENPKQ9BS16 269 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 ALOXE3Q9BYJ1 711 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 PNO1Q9NRX1 252 aaKnown RBP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 FBXW2Q9UKT8 454 aa16.94■□□□□ 0.3
CLOCK-203ENST00000435527 COPG1Q9Y678 874 aaKnown RBP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 V9GYY5 206 aaPredicted RBP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 UBR5O95071 2799 aaPredicted RBP16.94■□□□□ 0.3
CLOCK-203ENST00000435527 MYOCOSA0A1B0GUC4 107 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 BLACEA4D250 179 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 SMIM23A6NLE4 172 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 G3V2L1 256 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 CDH16O75309 829 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 GLRA3O75311 464 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 VPS4BO75351 444 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 EEDO75530 441 aaKnown RBP16.93■□□□□ 0.3
CLOCK-203ENST00000435527 UQCRHP07919 91 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 NUDT17P0C025 328 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 KRT15P19012 456 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 CPN2P22792 545 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 CRHR1P34998 444 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 CCT5P48643 541 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 SLC18A2Q05940 514 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 TERF2Q15554 542 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 C10orf62Q5T681 223 aaPredicted RBP16.93■□□□□ 0.3
CLOCK-203ENST00000435527 FAM219BQ5XKK7 198 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 TTC19Q6DKK2 380 aaPredicted RBP16.93■□□□□ 0.3
CLOCK-203ENST00000435527 GPR180Q86V85 440 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 ATCAYQ86WG3 371 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 L3HYPDHQ96EM0 354 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 SERPINI1Q99574 410 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 CDCP1Q9H5V8 836 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 MS4A12Q9NXJ0 267 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 VTI1BQ9UEU0 232 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 GRID1Q9ULK0 1009 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 VPS4AQ9UN37 437 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 ATG4BQ9Y4P1 393 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 ASB4Q9Y574 426 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 SHANK1Q9Y566 2161 aa16.93■□□□□ 0.3
CLOCK-203ENST00000435527 A0A0A6YYD5 115 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 TRAV17A0A0B4J275 112 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 OR5H15A6NDH6 313 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 TCP11X1B4DZS4 312 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 PROM1O43490 865 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 TMPRSS11DO60235 418 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 LDB3O75112 727 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 MYO1DO94832 1006 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 OR4F21O95013 312 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 PROCP04070 461 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 CD96P40200 585 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 HNRNPH2P55795 449 aaKnown RBP16.92■□□□□ 0.3
CLOCK-203ENST00000435527 IFT88Q13099 833 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 ERCC6LQ2NKX8 1250 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 EMBQ6PCB8 327 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 RPS19BP1Q86WX3 136 aaKnown RBP16.92■□□□□ 0.3
CLOCK-203ENST00000435527 LGI4Q8N135 537 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 BEST3Q8N1M1 668 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 ARMC10Q8N2F6 343 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 SLC5A8Q8N695 610 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 B3GNT7Q8NFL0 401 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 PTPMT1Q8WUK0 201 aaPredicted RBP16.92■□□□□ 0.3
CLOCK-203ENST00000435527 CAVIN3Q969G5 261 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 PARD6BQ9BYG5 372 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 ADAP2Q9NPF8 381 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 FARSBQ9NSD9 589 aaKnown RBP16.92■□□□□ 0.3
CLOCK-203ENST00000435527 TRPS1Q9UHF7 1281 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 ZNF223Q9UK11 482 aaPredicted RBP16.92■□□□□ 0.3
CLOCK-203ENST00000435527 SPACA6W5XKT8 324 aa16.92■□□□□ 0.3
CLOCK-203ENST00000435527 RP1L1Q8IWN7 2480 aaPredicted RBP16.92■□□□□ 0.3
CLOCK-203ENST00000435527 TLDC2A0PJX2 215 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 SYNDIG1LA6NDD5 238 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 WASHC1A8K0Z3 465 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 PLIN3O60664 434 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 SEMA3DO95025 777 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 PDYNP01213 254 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 FAM58BPP0C7Q3 252 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 KRT4P19013 534 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 GNLYP22749 145 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 TAS2R50P59544 299 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 IGLV3-21P80748 117 aaPredicted RBP16.91■□□□□ 0.3
CLOCK-203ENST00000435527 STX4Q12846 297 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 ELAVL1Q15717 326 aaKnown RBP16.91■□□□□ 0.3
CLOCK-203ENST00000435527 SGO1Q5FBB7 561 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 C18orf63Q68DL7 685 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 ZYG11AQ6WRX3 759 aa16.91■□□□□ 0.3
CLOCK-203ENST00000435527 ZNF382Q96SR6 550 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms