RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ZNF595Q8IYB9 648 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 SRFBP1Q8NEF9 429 aaKnown RBP13.91□□□□□ -0.18
RTN4-210ENST00000427710 NFAM1Q8NET5 270 aaPredicted RBP13.91□□□□□ -0.18
RTN4-210ENST00000427710 ACMSDQ8TDX5 336 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 DOK4Q8TEW6 326 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 HAS2Q92819 552 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 UCN3Q969E3 161 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 REPS1Q96D71 796 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 ZNF717Q9BY31 904 aaPredicted RBP13.91□□□□□ -0.18
RTN4-210ENST00000427710 ROGDIQ9GZN7 287 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 LYRM4Q9HD34 91 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 ADGRE2Q9UHX3 823 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 ZNF225Q9UK10 706 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 COPG1Q9Y678 874 aaKnown RBP13.91□□□□□ -0.18
RTN4-210ENST00000427710 NINQ8N4C6 2090 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 PTPN13Q12923 2485 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 USP9XQ93008 2570 aaPredicted RBP13.9□□□□□ -0.18
RTN4-210ENST00000427710 COL12A1Q99715 3063 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 ARHGAP10A1A4S6 786 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 WASHC1A8K0Z3 465 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 TCP11X1B4DZS4 312 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 CLDN4O14493 209 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 TMPRSS11DO60235 418 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 VPS4BO75351 444 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 SUPT7LO94864 414 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 SCELO95171 688 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 IFNA16P05015 189 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 ATP5F1P24539 256 aaPredicted RBP13.9□□□□□ -0.18
RTN4-210ENST00000427710 PTX3P26022 381 aaPredicted RBP13.9□□□□□ -0.18
RTN4-210ENST00000427710 BSGP35613 385 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 TNFSF10P50591 281 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 HSD17B7P56937 341 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 AP2B1P63010 937 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 HERVK_113P63132 956 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 CLCQ05315 142 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 TLR1Q15399 786 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 NR6A1Q15406 480 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 ACER2Q5QJU3 275 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 FRG2Q64ET8 278 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 SH2D5Q6ZV89 423 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 C4orf33Q8N1A6 199 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 ELP5Q8TE02 316 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 ADAMTS18Q8TE60 1221 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 THAP3Q8WTV1 239 aaPredicted RBP13.9□□□□□ -0.18
RTN4-210ENST00000427710 ANKRD9Q96BM1 317 aaPredicted RBP13.9□□□□□ -0.18
RTN4-210ENST00000427710 ZNF354BQ96LW1 612 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 FRG2BQ96QU4 278 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 HBEGFQ99075 208 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 ERVK-6Q9BXR3 956 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 HES7Q9BYE0 225 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 ALOXE3Q9BYJ1 711 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 VPS4AQ9UN37 437 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 MRPS33Q9Y291 106 aaKnown RBP13.9□□□□□ -0.18
RTN4-210ENST00000427710 TSC22D4Q9Y3Q8 395 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 FLNBO75369 2602 aaKnown RBP13.9□□□□□ -0.18
RTN4-210ENST00000427710 LRRK2Q5S007 2527 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 PCNX1Q96RV3 2341 aa13.9□□□□□ -0.18
RTN4-210ENST00000427710 TRBV11-1A0A0K0K1C0 115 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 OR5H15A6NDH6 313 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 PRKNO60260 465 aaPredicted RBP13.89□□□□□ -0.19
RTN4-210ENST00000427710 CTNSO60931 367 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 PDYNP01213 254 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 TSFMP43897 325 aaKnown RBP13.89□□□□□ -0.19
RTN4-210ENST00000427710 SRSF1Q07955 248 aaKnown RBP eCLIP13.89□□□□□ -0.194e-25■□□□□ 8.9
RTN4-210ENST00000427710 IFT88Q13099 833 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 MEP1AQ16819 746 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 ERCC6LQ2NKX8 1250 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 ZNF468Q5VIY5 522 aaPredicted RBP13.89□□□□□ -0.19
RTN4-210ENST00000427710 TDRPQ86YL5 185 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 ZNF321PQ8N8H1 164 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 GRHL3Q8TE85 626 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 AENQ8WTP8 325 aaKnown RBP13.89□□□□□ -0.19
RTN4-210ENST00000427710 NCLNQ969V3 563 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 SIGLEC12Q96PQ1 595 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 CENPKQ9BS16 269 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 C1QTNF3Q9BXJ4 246 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 LIN28AQ9H9Z2 209 aaKnown RBP13.89□□□□□ -0.19
RTN4-210ENST00000427710 DCDC2Q9UHG0 476 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 ZNF223Q9UK11 482 aaPredicted RBP13.89□□□□□ -0.19
RTN4-210ENST00000427710 ATG4BQ9Y4P1 393 aa13.89□□□□□ -0.19
RTN4-210ENST00000427710 SPTBN1Q01082 2364 aaKnown RBP13.89□□□□□ -0.19
RTN4-210ENST00000427710 FREM3P0C091 2139 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 A0A0A6YYD5 115 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 GLOD5A6NK44 160 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 GABRR3A8MPY1 467 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 G3V2L1 256 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 FOXE1O00358 373 aaPredicted RBP13.88□□□□□ -0.19
RTN4-210ENST00000427710 FGF17O60258 216 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 GLRA3O75311 464 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 OTCP00480 354 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 PROCP04070 461 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 GSTA1P08263 222 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 TNNI3P19429 210 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 IMPDH1P20839 514 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 PRKAA2P54646 552 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 TAS2R50P59544 299 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 PMP22Q01453 160 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 STX4Q12846 297 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 CUL3Q13618 768 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 TUBA3CQ13748 450 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms