RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 DYTNA2CJ06 578 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 TMPRSS11DO60235 418 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 SUPT7LO94864 414 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 OR4F21O95013 312 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 TAC1P20366 129 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 GNLYP22749 145 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 CPN2P22792 545 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ATP5F1P24539 256 aaPredicted RBP12.74□□□□□ -0.37
SNX3-204ENST00000426155 TNFSF10P50591 281 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 HSD17B7P56937 341 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 HERVK_113P63132 956 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 SLAMF1Q13291 335 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 TLR1Q15399 786 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ERCC6LQ2NKX8 1250 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ACER2Q5QJU3 275 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ABHD17BQ5VST6 288 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 C18orf63Q68DL7 685 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 TTC19Q6DKK2 380 aaPredicted RBP12.74□□□□□ -0.37
SNX3-204ENST00000426155 H3F3CQ6NXT2 135 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 MILR1Q7Z6M3 343 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 OR4N5Q8IXE1 308 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ZNF595Q8IYB9 648 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 C4orf33Q8N1A6 199 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 SRFBP1Q8NEF9 429 aaKnown RBP12.74□□□□□ -0.37
SNX3-204ENST00000426155 OR1N1Q8NGS0 311 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ELP5Q8TE02 316 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ADAMTS18Q8TE60 1221 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNX3-204ENST00000426155 UCN3Q969E3 161 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 RGMAQ96B86 450 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 REPS1Q96D71 796 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ERVK-6Q9BXR3 956 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ROGDIQ9GZN7 287 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 LYRM4Q9HD34 91 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ADGRE2Q9UHX3 823 aa12.74□□□□□ -0.37
SNX3-204ENST00000426155 ZNF223Q9UK11 482 aaPredicted RBP12.74□□□□□ -0.37
SNX3-204ENST00000426155 MRPS33Q9Y291 106 aaKnown RBP12.74□□□□□ -0.37
SNX3-204ENST00000426155 RP1L1Q8IWN7 2480 aaPredicted RBP12.73□□□□□ -0.37
SNX3-204ENST00000426155 TLDC2A0PJX2 215 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 ARHGAP10A1A4S6 786 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 WASHC1A8K0Z3 465 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 G3V2L1 256 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 CLDN4O14493 209 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 FGF17O60258 216 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 GLRA3O75311 464 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 PROCP04070 461 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 GSTA1P08263 222 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 BSGP35613 385 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 TSFMP43897 325 aaKnown RBP12.73□□□□□ -0.37
SNX3-204ENST00000426155 AP2B1P63010 937 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 PHEXP78562 749 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 CLCQ05315 142 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 MRPL49Q13405 166 aaKnown RBP12.73□□□□□ -0.37
SNX3-204ENST00000426155 GGTA1PQ4G0N0 100 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 FRG2Q64ET8 278 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 LCA5Q86VQ0 697 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 ATCAYQ86WG3 371 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 TDRPQ86YL5 185 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 APCDD1LQ8NCL9 501 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 ARMC2Q8NEN0 867 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 THAP3Q8WTV1 239 aaPredicted RBP12.73□□□□□ -0.37
SNX3-204ENST00000426155 SIGLEC12Q96PQ1 595 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 FRG2BQ96QU4 278 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 MRPL1Q9BYD6 325 aaKnown RBP12.73□□□□□ -0.37
SNX3-204ENST00000426155 HES7Q9BYE0 225 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.73□□□□□ -0.37
SNX3-204ENST00000426155 STMN3Q9NZ72 180 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 ATG4BQ9Y4P1 393 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 SVILO95425 2214 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 COL12A1Q99715 3063 aa12.73□□□□□ -0.37
SNX3-204ENST00000426155 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
SNX3-204ENST00000426155 A0A0A6YYD5 115 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 TRBV11-1A0A0K0K1C0 115 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 OR5H15A6NDH6 313 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 GLOD5A6NK44 160 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 FOXE1O00358 373 aaPredicted RBP12.72□□□□□ -0.37
SNX3-204ENST00000426155 PRKNO60260 465 aaPredicted RBP12.72□□□□□ -0.37
SNX3-204ENST00000426155 CTNSO60931 367 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 CDH16O75309 829 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 VPS4BO75351 444 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 OTCP00480 354 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 PDYNP01213 254 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 IFNA16P05015 189 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 KRT4P19013 534 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 PTX3P26022 381 aaPredicted RBP12.72□□□□□ -0.37
SNX3-204ENST00000426155 HTR6P50406 440 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 PMP22Q01453 160 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 TNFRSF17Q02223 184 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 SRSF1Q07955 248 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNX3-204ENST00000426155 STX4Q12846 297 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 IFT88Q13099 833 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 CUL3Q13618 768 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 TUBA3CQ13748 450 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 NR6A1Q15406 480 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 ZNF468Q5VIY5 522 aaPredicted RBP12.72□□□□□ -0.37
SNX3-204ENST00000426155 WDR93Q6P2C0 686 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 TUBA3EQ6PEY2 450 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 NUDT13Q86X67 352 aa12.72□□□□□ -0.37
SNX3-204ENST00000426155 ZCCHC7Q8N3Z6 543 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms