RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ZNF354BQ96LW1 612 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 DDX31Q9H8H2 851 aaKnown RBP19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 COPS7BQ9H9Q2 264 aaPredicted RBP19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 ATG4BQ9Y4P1 393 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 ASB4Q9Y574 426 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 POLEQ07864 2286 aa19.26■□□□□ 0.67
PKNOX1-202ENST00000418336 A8MUA0 341 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 G3V2L1 256 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 PRKNO60260 465 aaPredicted RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 GSTA1P08263 222 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 TSPAN8P19075 237 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 PTX3P26022 381 aaPredicted RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 SSR2P43308 183 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 CCNG1P51959 295 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 HERVK_113P63132 956 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 TUBA3CQ13748 450 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 ABHD17BQ5VST6 288 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 TUBA3EQ6PEY2 450 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 ATCAYQ86WG3 371 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 MYLK4Q86YV6 388 aaPredicted RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 EFCAB3Q8N7B9 438 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 B3GNT7Q8NFL0 401 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 OR1N1Q8NGS0 311 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 EPS8L3Q8TE67 593 aaKnown RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 GRHL3Q8TE85 626 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 AENQ8WTP8 325 aaKnown RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 UBLCP1Q8WVY7 318 aaPredicted RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 SIGLEC12Q96PQ1 595 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 ERVK-6Q9BXR3 956 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 TRIM45Q9H8W5 580 aaPredicted RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 FARSBQ9NSD9 589 aaKnown RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 VTI1BQ9UEU0 232 aa19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 COPG1Q9Y678 874 aaKnown RBP19.25■□□□□ 0.67
PKNOX1-202ENST00000418336 ESPL1Q14674 2120 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 TRAV17A0A0B4J275 112 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 MYOCOSA0A1B0GUC4 107 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 DYTNA2CJ06 578 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 FGF17O60258 216 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 LDB3O75112 727 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 VPS4BO75351 444 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 PRKRAO75569 313 aaKnown RBP19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 MYO1DO94832 1006 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 TPP2P29144 1249 aaPredicted RBP19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 CD96P40200 585 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 SLCO1A2P46721 670 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 PRKAA2P54646 552 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 MLF1P58340 268 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 SLAMF1Q13291 335 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 NR6A1Q15406 480 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 MEP1AQ16819 746 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 AP5B1Q2VPB7 878 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 FRG2Q64ET8 278 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 C18orf63Q68DL7 685 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 UCN3Q969E3 161 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 REPS1Q96D71 796 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 L3HYPDHQ96EM0 354 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 FRG2BQ96QU4 278 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 SLX1AQ9BQ83 275 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 FBXW2Q9UKT8 454 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 VPS4AQ9UN37 437 aa19.24■□□□□ 0.67
PKNOX1-202ENST00000418336 WASHC1A8K0Z3 465 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 CLDN4O14493 209 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 PROM1O43490 865 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 NEURL1O76050 574 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 PROCP04070 461 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 IMPDH1P20839 514 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 ATP5F1P24539 256 aaPredicted RBP19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 TDGF1P3P51864 188 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 CLCQ05315 142 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 SLC13A2Q13183 592 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 WDR93Q6P2C0 686 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 DGAT2L6Q6ZPD8 337 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 ZNF321PQ8N8H1 164 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 ARMC2Q8NEN0 867 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 OR2W6PQ8NHA6 318 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 FAR1Q8WVX9 515 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 MTFMTQ96DP5 389 aaKnown RBP19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 SCMH1Q96GD3 660 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 MAGEB10Q96LZ2 347 aaPredicted RBP19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 HES7Q9BYE0 225 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 GSTO2Q9H4Y5 243 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 CDCP1Q9H5V8 836 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 ADAP2Q9NPF8 381 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 PNO1Q9NRX1 252 aaKnown RBP19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 TEKT2Q9UIF3 430 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 MRPS33Q9Y291 106 aaKnown RBP19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 PCDHGB6Q9Y5F9 930 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 HECTD1Q9ULT8 2610 aa19.23■□□□□ 0.67
PKNOX1-202ENST00000418336 DOPEY2Q9Y3R5 2298 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 A0A1W2PR48 441 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 BLACEA4D250 179 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 PRAMEF2O60811 474 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 WISP2O76076 250 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 SEMA3DO95025 777 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 DDAH2O95865 285 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 RNF224P0DH78 156 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 TNFRSF17Q02223 184 aa19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 TBL3Q12788 808 aaKnown RBP19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 ELAVL1Q15717 326 aaKnown RBP19.22■□□□□ 0.67
PKNOX1-202ENST00000418336 INAQ16352 499 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms