RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SEMA4BQ9NPR2 832 aaPredicted RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 TUBA8Q9NY65 449 aaPredicted RBP11.25□□□□□ -0.61
LIMS2-210ENST00000413578 CRIM1Q9NZV1 1036 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 DAPP1Q9UN19 280 aa11.25□□□□□ -0.61
LIMS2-210ENST00000413578 PABPN1LA6NDY0 278 aaKnown RBP11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CDC7O00311 574 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 PROM1O43490 865 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 B3GALT2O43825 422 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 HCN1O60741 890 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CTNSO60931 367 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CLEC3AO75596 197 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 C1GALT1C1LP0DN25 315 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CCL3P10147 92 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CERS1P27544 350 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 DNASE1L1P49184 302 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 RNF4P78317 190 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 SLBPQ14493 270 aaKnown RBP eCLIP11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CEBPEQ15744 281 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 C1orf185Q5T7R7 199 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 PRAMEF9Q5VWM5 478 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 TMIGD1Q6UXZ0 262 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CLNKQ7Z7G1 428 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 ZZZ3Q8IYH5 903 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 OR2L5Q8NG80 312 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 OR14A16Q8NHC5 309 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 MBD6Q96DN6 1003 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 MS4A14Q96JA4 679 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 NAT9Q9BTE0 207 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CLEC4MQ9H2X3 399 aaPredicted RBP11.24□□□□□ -0.61
LIMS2-210ENST00000413578 NT5DC2Q9H857 520 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 SACM1LQ9NTJ5 587 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 SPRR3Q9UBC9 169 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 MRPS33Q9Y291 106 aaKnown RBP11.24□□□□□ -0.61
LIMS2-210ENST00000413578 ATG4BQ9Y4P1 393 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 OARD1Q9Y530 152 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 PCDHGB3Q9Y5G1 929 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 CLCA3PQ9Y6N3 262 aa11.24□□□□□ -0.61
LIMS2-210ENST00000413578 HRNRQ86YZ3 2850 aaPredicted RBP11.24□□□□□ -0.61
LIMS2-210ENST00000413578 A0A088AWK7 358 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 ATP6AP2A0A1C7CYW4 349 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 NPEPPSL1A6NEC2 478 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SYT5O00445 386 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 ATP6AP2O75787 350 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 FOSL1P15407 271 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 GNAZP19086 355 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF10P21506 573 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SAT1P21673 171 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 PEX19P40855 299 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 GDF5P43026 501 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 FNTAP49354 379 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 MAN2A2P49641 1150 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 HNMTP50135 292 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 PLA2G16P53816 162 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 MTTPP55157 894 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 BMPR2Q13873 1038 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SNTB1Q13884 538 aaKnown RBP11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SLC10A1Q14973 349 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 MPEG1Q2M385 716 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 C18orf21Q32NC0 220 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-210ENST00000413578 ADNP2Q6IQ32 1131 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 TRMT10BQ6PF06 316 aaKnown RBP11.23□□□□□ -0.61
LIMS2-210ENST00000413578 POMZP3Q6PJE2 187 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 LYPD8Q6UX82 237 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 FAM47EQ6ZV65 393 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 RELL2Q8NC24 303 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SLC2A12Q8TD20 617 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF721Q8TF20 911 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SLCO2A1Q92959 643 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SARAFQ96BY9 339 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 RHBDF1Q96CC6 855 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SERINC2Q96SA4 455 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 SH3GL2Q99962 352 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 CNPPD1Q9BV87 410 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 ALOXE3Q9BYJ1 711 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 PITHD1Q9GZP4 211 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-210ENST00000413578 REXO4Q9GZR2 422 aaKnown RBP11.23□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF703Q9H7S9 590 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-210ENST00000413578 B4GALT7Q9UBV7 327 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 ACAD8Q9UKU7 415 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 PLEKHA6Q9Y2H5 1048 aa11.23□□□□□ -0.61
LIMS2-210ENST00000413578 TRGV5A0A0B4J1U4 118 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 MYOCOSA0A1B0GUC4 107 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 LRRC3CA6NJW4 275 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 A6NNC1 897 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 FAM47E-STBD1D6RA91 191 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 DNALI1O14645 258 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 ETHE1O95571 254 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 IGKV3-11P04433 115 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 IFNA16P05015 189 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 RFPL3SP0C7P2 107 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 GABRA1P14867 456 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 CD22P20273 847 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 IVDP26440 423 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 KIR2DL3P43628 341 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 PPP2R2AP63151 447 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 ADAM8P78325 824 aa11.22□□□□□ -0.61
LIMS2-210ENST00000413578 EFTUD2Q15029 972 aaKnown RBP eCLIP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 ZNF791Q3KP31 576 aaPredicted RBP11.22□□□□□ -0.61
LIMS2-210ENST00000413578 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms