RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 SCAMP1O15126 338 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 CXCL14O95715 111 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SCGB1D2O95969 90 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 PAHP00439 452 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 MT-ND2P03891 347 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 BCL7AQ4VC05 210 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 KLHL26Q53HC5 615 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 LIPJQ5W064 366 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SLC8B1Q6J4K2 584 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TIFAQ96CG3 184 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 CNDP2Q96KP4 475 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 PCYT2Q99447 389 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF350Q9GZX5 532 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 POPDC3Q9HBV1 291 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 ATPIF1Q9UII2 106 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 YARS2Q9Y2Z4 477 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SCN7AQ01118 1682 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SCN2BO60939 215 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 CAPN15O75808 1086 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 DNASE1P24855 282 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 ACRV1P26436 265 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 CCR8P51685 355 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SMN1Q16637 294 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 VMACQ2NL98 169 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TMEM44Q2T9K0 475 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 C10orf62Q5T681 223 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TXNDC8Q6A555 127 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SYNPOQ8N3V7 929 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 ZDHHC1Q8WTX9 485 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 FAM46AQ96IP4 442 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 ADAD1Q96M93 576 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SPATA9Q9BWV2 254 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 OR51I1Q9H343 314 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SUV39H2Q9H5I1 410 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TREM1Q9NP99 234 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 DCAF13Q9NV06 445 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 LAMP5Q9UJQ1 280 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 GPR45Q9Y5Y3 372 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 ADAMTS7Q9UKP4 1686 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 A0A1W2PRU2 124 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 A6NL46 340 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SLC38A8A6NNN8 435 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 MEN1O00255 615 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 FLRT2O43155 660 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 PPM1BO75688 479 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 RPL17P18621 184 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 NPR2P20594 1047 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 MAP3K8P41279 467 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 GPR4P46093 362 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 CLK3P49761 638 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 PGDP52209 483 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 RAB2AP61019 212 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SELENOWP63302 87 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 GDF6Q6KF10 455 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 HUS1BQ8NHY5 278 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 RIT1Q92963 219 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 C12orf66Q96MD2 445 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 CUEDC1Q9NWM3 386 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 MYO16Q9Y6X6 1858 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 APOC3P02656 99 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 RHCEP18577 417 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 HNF1BP35680 557 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TMEM69Q5SWH9 247 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 KANK2Q63ZY3 851 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 FBXO42Q6P3S6 717 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 HAGHLQ6PII5 290 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 LNX2Q8N448 690 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 MFSD2AQ8NA29 543 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 OR2T33Q8NG76 320 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 RHOXF1Q8NHV9 184 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 FATE1Q969F0 183 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 APIPQ96GX9 242 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 FUBP3Q96I24 572 aaKnown RBP eCLIP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 MAPKAP1Q9BPZ7 522 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 FUZQ9BT04 418 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 ADAP2Q9NPF8 381 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 SRRDQ9UH36 339 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 MRPS23Q9Y3D9 190 aaKnown RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 PCDHB11Q9Y5F2 797 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TRPM3Q9HCF6 1732 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3DA0A087WVF3 549 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3IA0A087WXS9 549 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3EA0A087X179 549 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3KA0A087X1G2 549 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 FEZF1A0PJY2 475 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3FA6NER0 549 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 AGAP5A6NIR3 686 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3LB9A6J9 549 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 RFPL3O75679 317 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3HP0C7X1 549 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 PFKLP17858 780 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 KCNC4Q03721 635 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 USF2Q15853 346 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3GQ6DHY5 549 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3CQ6IPX1 549 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 NRARPQ7Z6K4 114 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 TBC1D3Q8IZP1 549 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-201ENST00000380152 ZNF676Q8N7Q3 588 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 OR7G1Q8NGA0 311 aa4.03□□□□□ -1.76
BRCA2-201ENST00000380152 THAP6Q8TBB0 222 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms