RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TIGARQ9NQ88 270 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 PAK6Q9NQU5 681 aaPredicted RBP8.22□□□□□ -1.09
ABCA4-201ENST00000370225 MYH10P35580 1976 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 KDM4BO94953 1096 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 H2BFMP0C1H6 154 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 ZNF865P0CJ78 1059 aaPredicted RBP8.22□□□□□ -1.09
ABCA4-201ENST00000370225 PRSS56P0CW18 603 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 IL1RNP18510 177 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 TYSND1Q2T9J0 566 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 OGFRL1Q5TC84 451 aaPredicted RBP8.22□□□□□ -1.09
ABCA4-201ENST00000370225 IGFN1Q86VF2 1251 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 SLC15A3Q8IY34 581 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 CHST14Q8NCH0 376 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 OR8K5Q8NH50 307 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 SHKBP1Q8TBC3 707 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 KIAA1191Q96A73 305 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 ERMAPQ96PL5 475 aaPredicted RBP8.22□□□□□ -1.09
ABCA4-201ENST00000370225 BEX2Q9BXY8 128 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 BEX1Q9HBH7 125 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 SRA1Q9HD15 236 aaKnown RBP8.22□□□□□ -1.09
ABCA4-201ENST00000370225 ZNF701Q9NV72 531 aaPredicted RBP8.22□□□□□ -1.09
ABCA4-201ENST00000370225 CCDC59Q9P031 241 aaKnown RBP8.22□□□□□ -1.09
ABCA4-201ENST00000370225 SARDHQ9UL12 918 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 PEX16Q9Y5Y5 336 aa8.22□□□□□ -1.09
ABCA4-201ENST00000370225 COL1A1P02452 1464 aaPredicted RBP8.22□□□□□ -1.09
ABCA4-201ENST00000370225 GSRP00390 522 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 ADORA3P0DMS8 318 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 HERV-K104P61576 105 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 HNRNPKP61978 463 aaKnown RBP eCLIP8.21□□□□□ -1.09
ABCA4-201ENST00000370225 DAG1Q14118 895 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 LAS2Q8IYD9 372 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 MAP3K3Q99759 626 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 SLC17A9Q9BYT1 436 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 C14orf105Q9NVL8 296 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 PRODH2Q9UF12 536 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 NFAT5O94916 1531 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.21□□□□□ -1.09
ABCA4-201ENST00000370225 LCHNA4D1U4 455 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 ACOX3O15254 700 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 CDRT1O95170 752 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 UQCRC2P22695 453 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 MAOBP27338 520 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 ELAVL3Q14576 367 aaKnown RBP8.21□□□□□ -1.09
ABCA4-201ENST00000370225 TMEM44Q2T9K0 475 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 TRAPPC6BQ86SZ2 158 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 PRR22Q8IZ63 422 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 PHTF2Q8N3S3 785 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 INO80EQ8NBZ0 244 aaPredicted RBP8.21□□□□□ -1.09
ABCA4-201ENST00000370225 OR51A7Q8NH64 312 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 WDR20Q8TBZ3 569 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 GNPDA2Q8TDQ7 276 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 TRIM43Q96BQ3 446 aaPredicted RBP8.21□□□□□ -1.09
ABCA4-201ENST00000370225 TMCO6Q96DC7 493 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 MRGPRX2Q96LB1 330 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 KCNK12Q9HB15 430 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 KCMF1Q9P0J7 381 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 SPEF2Q9C093 1822 aa8.21□□□□□ -1.09
ABCA4-201ENST00000370225 YY2O15391 372 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 NUAK1O60285 661 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 RAB36O95755 333 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 EXOC3L2Q2M3D2 409 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 PSAPL1Q6NUJ1 521 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 PAQR7Q86WK9 346 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 LIX1LQ8IVB5 337 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 NATD1Q8N6N6 113 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 TCEANCQ8N8B7 351 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 OR51G2Q8NGK0 314 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 OR4C15Q8NGM1 316 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 RAB7BQ96AH8 199 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 GPR22Q99680 433 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 SLC6A15Q9H2J7 730 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 MYH11P35749 1972 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 OTOL1A6NHN0 477 aaPredicted RBP8.21□□□□□ -1.1
ABCA4-201ENST00000370225 LSM1O15116 133 aaKnown RBP8.21□□□□□ -1.1
ABCA4-201ENST00000370225 PEPDP12955 493 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 PIK3CBP42338 1070 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 CDH15P55291 814 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 DEFB103AP81534 67 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 CATSPEREQ5SY80 951 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 RAB11FIP2Q7L804 512 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 PLXDC1Q8IUK5 500 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 OR2L2Q8NH16 312 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 TMEM234Q8WY98 164 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 C1orf21Q9H246 121 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 PCDHGA2Q9Y5H1 932 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 TEX264Q9Y6I9 313 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 SMCO3A2RU48 225 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 SRRM3A6NNA2 597 aaPredicted RBP8.21□□□□□ -1.1
ABCA4-201ENST00000370225 NR2C1P13056 603 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 INCA1Q0VD86 236 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 KBTBD6Q86V97 674 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 TOMM5Q8N4H5 51 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 OR13C3Q8NGS6 347 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 CASTOR1Q8WTX7 329 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 DAZLQ92904 295 aaKnown RBP8.21□□□□□ -1.1
ABCA4-201ENST00000370225 C1orf74Q96LT6 269 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 RPF2Q9H7B2 306 aaKnown RBP8.21□□□□□ -1.1
ABCA4-201ENST00000370225 CITO14578 2027 aa8.21□□□□□ -1.1
ABCA4-201ENST00000370225 ZNF821O75541 412 aaPredicted RBP8.21□□□□□ -1.1
ABCA4-201ENST00000370225 IFNA21P01568 189 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms