RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 BEX1Q9HBH7 125 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 MAN2B2Q9Y2E5 1009 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 FAM172BPA6NC97 362 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 MANSC4A6NHS7 340 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 YY2O15391 372 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ATG13O75143 517 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 H1F0P07305 194 aaKnown RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 PRKAR1AP10644 381 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 PDHA2P29803 388 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 SDC2P34741 201 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 DSC1Q08554 894 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF763Q0D2J5 394 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 FADDQ13158 208 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 GINS1Q14691 196 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ARSIQ5FYB1 569 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 OR2G6Q5TZ20 316 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 PLAG1Q6DJT9 500 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 FRMPD2BQ6IN97 320 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 COMMD6Q7Z4G1 85 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF614Q8N883 585 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 DENND6BQ8NEG7 585 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 FLCNQ8NFG4 579 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 OR2AG1Q9H205 316 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 LINC00597Q9H2U6 94 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF226Q9NYT6 803 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 SLC45A1Q9Y2W3 748 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 YARS2Q9Y2Z4 477 aaKnown RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 RPL36Q9Y3U8 105 aaKnown RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 A0A0G2JMZ2 1700 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 LRRC37A2A6NM11 1700 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF236Q9UL36 1845 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 TRBV4-1A0A0J9YWV2 114 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ISM1B1AKI9 464 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 H7C0S8 307 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 SERPINI2O75830 405 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 IGLV3-27P01718 113 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 CBSLP0DN79 551 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 RPS3P23396 243 aaKnown RBP eCLIP6.29□□□□□ -1.42e-6■■□□□ 11.8
CSDE1-203ENST00000358528 CBSP35520 551 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 TALDO1P37837 337 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 RNF144AP50876 292 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 PRKCDQ05655 676 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 MGAT3Q09327 533 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 COX10Q12887 443 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 VEZF1Q14119 521 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 BAK1Q16611 211 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 KLHL12Q53G59 568 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 B3GLCTQ6Y288 498 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 GLCCI1Q86VQ1 547 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 IQCHQ86VS3 1027 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ZNF740Q8NDX6 193 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 PCNPQ8WW12 178 aaKnown RBP6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ASB11Q8WXH4 323 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 LRR1Q96L50 414 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 KCTD7Q96MP8 289 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 MAPKAP1Q9BPZ7 522 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 TEX12Q9BXU0 123 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ING3Q9NXR8 418 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 DKK3Q9UBP4 350 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 SPATA2Q9UM82 520 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 GPSM3Q9Y4H4 160 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 PCDHGB1Q9Y5G3 927 aa6.29□□□□□ -1.4
CSDE1-203ENST00000358528 ZSCAN5BA6NJL1 495 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 H3BNC9 293 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 M0R3H8 397 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 BTN3A3O00478 584 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 PLD2O14939 933 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 LRRTM2O43300 516 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 F11P03951 625 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 CYP2A6P11509 494 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 CELP19835 753 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 GPR1P46091 355 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 CTSCP53634 463 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ST8SIA6P61647 398 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 PTSQ03393 145 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MAP4K2Q12851 820 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 DUSP7Q16829 419 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SPIN4Q56A73 249 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 IDNKQ5T6J7 187 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 LIPJQ5W064 366 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SMARCD3Q6STE5 483 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MARCH9Q86YJ5 346 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 RBM45Q8IUH3 476 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 LACC1Q8IV20 430 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 OXR1Q8N573 874 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 ATP6V1C2Q8NEY4 427 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TEX47Q8TBZ9 253 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MND1Q9BWT6 205 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 STMN3Q9NZ72 180 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 STOX2Q9P2F5 926 aaPredicted RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 DNMT3BQ9UBC3 853 aaKnown RBP6.28□□□□□ -1.4
CSDE1-203ENST00000358528 SEC14L4Q9UDX3 406 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MAPRE3Q9UPY8 281 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 TRAV6A0A075B6T7 132 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 C12orf71A8MTZ7 269 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MEN1O00255 615 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 INPPL1O15357 1258 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 MPZL2O60487 215 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 NCR1O76036 304 aa6.28□□□□□ -1.4
CSDE1-203ENST00000358528 POP4O95707 220 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms