RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 EBF1Q9UH73 591 aa14.41□□□□□ -0.1
NDFIP2-201ENST00000218652 PADI2Q9Y2J8 665 aa14.41□□□□□ -0.1
NDFIP2-201ENST00000218652 MRPS17Q9Y2R5 130 aaKnown RBP14.41□□□□□ -0.1
NDFIP2-201ENST00000218652 CITO14578 2027 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 SMCO3A2RU48 225 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 KDELR3O43731 214 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 ADH5P11766 374 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 EDNRBP24530 442 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 RFC2P35250 354 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 NNATQ16517 81 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 UNC50Q53HI1 259 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 PIGGQ5H8A4 983 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 RAB11FIP2Q7L804 512 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 ZSWIM9Q86XI8 627 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 ELMOD2Q8IZ81 293 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 OR52B6Q8NGF0 335 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 OR8J1Q8NGP2 316 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 LRRC15Q8TF66 581 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 HDHD5Q9BXW7 423 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 SMG9Q9H0W8 520 aaKnown RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 POT1Q9NUX5 634 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 EXOSC1Q9Y3B2 195 aaKnown RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 SFTPBP07988 381 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 HAPLN1P10915 354 aaPredicted RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 GTF2F2P13984 249 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 HLCSP50747 726 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 NKX2-5P52952 324 aaPredicted RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 ATG9BQ674R7 924 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 LMO3Q8TAP4 145 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 FNDC8Q8TC99 324 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 PXYLP1Q8TE99 480 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 CREB3L1Q96BA8 519 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 TBCCD1Q9NVR7 557 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 PCDHB11Q9Y5F2 797 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 ARHGEF28Q8N1W1 1705 aaKnown RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 PLD2O14939 933 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 ANXA3P12429 323 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 GP1BBP13224 206 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 HTR1EP28566 365 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 RBMXP38159 391 aaKnown RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 GCGRP47871 477 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 UBE2Q1Q7Z7E8 422 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 OR8J3Q8NGG0 315 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 FEVQ99581 238 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 DOHHQ9BU89 302 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 FUNDC2Q9BWH2 189 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 GPR88Q9GZN0 384 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 DCKP27707 260 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 NCS1P62166 190 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 EXOC3L2Q2M3D2 409 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 BEND4Q6ZU67 534 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 GALNT6Q8NCL4 622 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 ZNF461Q8TAF7 563 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 DOK4Q8TEW6 326 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 C11orf84Q9BUA3 381 aaPredicted RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 NPLQ9BXD5 320 aaPredicted RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 POLDIP3Q9BY77 421 aaKnown RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 TMEM184CQ9NVA4 438 aa14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 NLE1Q9NVX2 485 aaPredicted RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 MARCH4Q9P2E8 410 aaPredicted RBP14.4□□□□□ -0.1
NDFIP2-201ENST00000218652 SH3PXD2BA1X283 911 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 HTR3EA5X5Y0 456 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 ZNF821O75541 412 aaPredicted RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 CDC123O75794 336 aaPredicted RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 MLLT3P42568 568 aaPredicted RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 HERV-K104P61576 105 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 RPS26P62854 115 aaKnown RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 PPIGQ13427 754 aaKnown RBP eCLIP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 PON2Q15165 354 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 AADACL4Q5VUY2 407 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 SLC44A3Q8N4M1 653 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 GATAD2BQ8WXI9 593 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 LRR1Q96L50 414 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 SMURF1Q9HCE7 757 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 TMEM248Q9NWD8 314 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 SARDHQ9UL12 918 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 TMEM5Q9Y2B1 443 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 DISC1C4P0D8 188 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 CFIP05156 583 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 CD1DP15813 335 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 LEPRP48357 1165 aaKnown RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 SLC10A2Q12908 348 aaPredicted RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 HSD17B12Q53GQ0 312 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 GPAT4Q86UL3 456 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 TSNAXQ99598 290 aaKnown RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 XYLT2Q9H1B5 865 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 SRA1Q9HD15 236 aaKnown RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 ARID1AO14497 2285 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 MTMR11A4FU01 709 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 E7ESA3 106 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 TSPAN6O43657 245 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 SSX5O60225 188 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 RASAL1O95294 804 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 ASGR2P07307 311 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 SPARCP09486 303 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 POLR2CP19387 275 aaPredicted RBP14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 TUBG1P23258 451 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 ATP4BP51164 291 aa14.39□□□□□ -0.11
NDFIP2-201ENST00000218652 CHRDL2Q6WN34 429 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms