RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Panx1Q9JIP4 426 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Hspb3Q9QZ57 154 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Racgap1Q9WVM1 628 aa8.29□□□□□ -1.08
Trim39-201ENSMUST00000042717 Adh6bA0A1D5RMB0 384 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn1r177E9PXM3 309 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfp558E9Q1J0 407 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Il20rbE9Q9A6 308 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm5861F6VCN9 180 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 4933402N22RikF7D1B3 190 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gp5O08742 567 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gpr27O54897 379 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tpst1O70281 370 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 HbaP01942 142 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 CfpP11680 464 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Psmd3P14685 530 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zp2P20239 713 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Klrb1aP27811 227 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Prim2P33610 505 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 FahP35505 419 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fmo1P50285 532 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ccng1P51945 294 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rab8bP61028 207 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lrig1P70193 1091 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lrrc74bQ14BP6 391 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Trim75Q3UWZ0 467 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ubxn7Q6P5G6 467 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cox15Q8BJ03 413 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fam124bQ8BLQ0 456 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tmem150bQ8R218 238 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn1r234Q8R298 329 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Impa2Q91UZ5 290 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pwp1Q99LL5 501 aaKnown RBP8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Hacl1Q9QXE0 581 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lhx9Q9WUH2 397 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Myo15bI7HPW8 3033 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 A6H6Q4 206 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pramef20B1ARV6 477 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Foxd2O35392 492 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Angpt2O35608 496 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfp59P16373 634 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Wnt3P17553 355 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 PdxpP60487 292 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Defb43Q30KM9 69 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Coq10bQ3THF9 240 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr1288Q7TQY0 312 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sephs1Q8BH69 392 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pgs1Q8BHF7 553 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Oscp1Q8BHW2 379 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pias2Q8C5D8 621 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 RergQ8R367 199 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rpusd1Q8VCZ8 306 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr986Q8VFN6 312 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pcdhga11Q91XY8 933 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 PyurfQ9D1C3 112 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 CalyQ9DCA7 226 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 AnkhQ9JHZ2 492 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lgals8Q9JL15 316 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gdf2Q9WV56 428 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 LipgQ9WVG5 500 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gtf3c1Q8K284 2101 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 MgaA2AWL7 3003 aaKnown RBP8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dmxl1Q6PNC0 3013 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dmrta2A2A9A2 531 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ajap1A2ALI5 412 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 PpigA2AR02 752 aaKnown RBP8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr59B1ARL3 323 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zcchc7B1AX39 541 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc9a5B2RXE2 898 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm6502L7N456 481 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 MagP20917 626 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tnfsf9P41274 309 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Wdr36Q3TAQ9 899 aaKnown RBP8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lpcat1Q3TFD2 534 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc47a2Q3V050 573 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Clec4a4Q5YIR8 236 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Lrrc75bQ7TPD7 306 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Otub1Q7TQI3 271 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mfn1Q811U4 741 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cstf2tQ8C7E9 632 aaKnown RBP8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Utp6Q8VCY6 597 aaKnown RBP8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vps4aQ8VEJ9 437 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Oas1hQ8VI97 369 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc15a4Q91W98 574 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 SharpinQ91WA6 380 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Pycr1Q922W5 309 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dph2Q9CR25 489 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Eral1Q9CZU4 437 aaKnown RBP8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fip1l1Q9D824 581 aaKnown RBP8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Snap29Q9ERB0 260 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Spry4Q9WTP2 300 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cacna1hO88427 2365 aa8.28□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm3020E9Q3J7 150 aa8.27□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm379J3QQ19 296 aa8.27□□□□□ -1.09
Trim39-201ENSMUST00000042717 Bard1O70445 765 aa8.27□□□□□ -1.09
Trim39-201ENSMUST00000042717 UgdhO70475 493 aa8.27□□□□□ -1.09
Trim39-201ENSMUST00000042717 DdcO88533 480 aa8.27□□□□□ -1.09
Trim39-201ENSMUST00000042717 Grap2O89100 322 aa8.27□□□□□ -1.09
Trim39-201ENSMUST00000042717 GzmcP08882 248 aa8.27□□□□□ -1.09
Trim39-201ENSMUST00000042717 AvpP35455 168 aa8.27□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pex2P55098 305 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms