RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 St8sia4Q64692 359 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Znf750Q8BH05 703 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Efemp1Q8BPB5 493 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Sumf2Q8BPG6 308 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Dpep2Q8C255 478 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Nedd4lQ8CFI0 1004 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Fam129bQ8R1F1 749 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Rbm12Q8R4X3 992 aaKnown RBP15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Pbdc1Q9D0B6 198 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Rgs6Q9Z2H2 472 aa15.75■□□□□ 0.11
Shh-201ENSMUST00000002708 Plxna2P70207 1894 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 AccsA2AIG8 502 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr521E9Q519 321 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Fabp3P11404 133 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Dsc1P55849 886 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Sox4Q06831 440 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 H2-M3Q31093 336 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Runx1t1Q61909 577 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Vps37aQ8CHS8 397 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Cops8Q8VBV7 209 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Wdr53Q9DB94 358 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Amdhd1Q9DBA8 426 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Adam25Q9R159 760 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Trmt1lA2RSY6 728 aaKnown RBP15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 5730507C01RikJ3QPX0 416 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Ido1P28776 407 aaKnown RBP15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Ntsr2P70310 416 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Slc37a3Q3TIT8 494 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 PomkQ3TUA9 349 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Zdhhc20Q5Y5T1 380 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Runx3Q64131 409 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr1322Q7TQW3 310 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr1308Q7TQX0 320 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Cfap20Q8BTU1 193 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 FkrpQ8CG64 494 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Cpne5Q8JZW4 593 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Q8K039 155 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Fndc5Q8K4Z2 209 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Smurf1Q9CUN6 731 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Maf1Q9D0U6 258 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Slc25a13Q9QXX4 676 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Acot2Q9QYR9 453 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Asb3Q9WV72 525 aa15.74■□□□□ 0.11
Shh-201ENSMUST00000002708 Ect2lA0A140LIP2 953 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Gm14147A2AQX6 640 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 RerglB2RVE2 204 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Rgs7O54829 469 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Asna1O54984 348 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Tulp3O88413 460 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 IghmP01872 454 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Zfp28P10078 825 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 ThP24529 498 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Upp1P52624 311 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Cxcr4P70658 359 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Rhox11Q810N8 206 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Txnl4bQ8BUH1 149 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Nlgn3Q8BYM5 825 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Ddx52Q8K301 598 aaKnown RBP15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 FevQ8QZW2 237 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Mlc1Q8VHK5 382 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Yaf2Q99LW6 179 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Aar2Q9D2V5 384 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Dll4Q9JI71 686 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 TescQ9JKL5 214 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Clec1bQ9JL99 229 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Trgv2A2J008 116 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Vmn1r77E9PY60 306 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Pld3O35405 488 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Zfp935Q14DI0 353 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Dusp5Q1HL35 384 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Stox2Q499E5 926 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 OclnQ61146 521 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 BC061212Q6P8K3 481 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Rsbn1Q80T69 795 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Asb17Q8VHP9 295 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Impa2Q91UZ5 290 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Mcoln1Q99J21 580 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Agpat5Q9D1E8 365 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Q9DAY5 185 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Uqcrc2Q9DB77 453 aaKnown RBP15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Trim39Q9ESN2 488 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Ehd3Q9QXY6 535 aa15.73■□□□□ 0.11
Shh-201ENSMUST00000002708 Klhl3E0CZ16 587 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Prdm14E9Q3T6 561 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Btg4O70552 250 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Slc7a2P18581 657 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Bmp7P23359 430 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 CntfP51642 198 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Tsc22d1P62500 1077 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Cab39Q06138 341 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Tmub2Q3V209 319 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Gpr165Q3V3A3 455 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Sez6l2Q4V9Z5 910 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr765Q7TRI6 309 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Zc3hav1lQ8BFR1 296 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Elmod2Q8BGF6 293 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Pp2d1Q8BVT6 620 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Zhx3Q8C0Q2 951 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Ak6Q8VCP8 172 aa15.72■□□□□ 0.11
Shh-201ENSMUST00000002708 Olfr767Q8VG33 309 aa15.72■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms