RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 PCDHB11Q9Y5F2 797 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 ARID1AO14497 2285 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 TRAV19A0A0A6YYK7 116 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 EFCAB10A6NFE3 127 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 PDZK1P1A8MUH7 402 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 TGM5O43548 720 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 TSC22D2O75157 780 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 ZNF821O75541 412 aaPredicted RBP7.38□□□□□ -1.23
NECAP1-221ENST00000639955 AP2A2O94973 939 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 ADORA3P0DMS8 318 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 ATP6V1E1P36543 226 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 CCR2P41597 374 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 SLC16A1P53985 500 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 MANFP55145 182 aaKnown RBP7.38□□□□□ -1.23
NECAP1-221ENST00000639955 ELP6Q0PNE2 266 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 MAP4K2Q12851 820 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 PIN1Q13526 163 aaPredicted RBP7.38□□□□□ -1.23
NECAP1-221ENST00000639955 GPR33Q49SQ1 333 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 IFI44LQ53G44 452 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 TCEAL5Q5H9L2 206 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 SIGIRRQ6IA17 410 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 LRRC70Q7Z2Q7 622 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 ARMC8Q8IUR7 673 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 SFTPA1Q8IWL2 248 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 MFSD4AQ8N468 514 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 AMER2Q8N7J2 671 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 DYNC2LI1Q8TCX1 351 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 F2RL3Q96RI0 385 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 SLC29A3Q9BZD2 475 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 TM7SF3Q9NS93 570 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 NDUFAF4Q9P032 175 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 KLHL3Q9UH77 587 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 TAC3Q9UHF0 121 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 RIMKLBQ9ULI2 386 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 OR51B4Q9Y5P0 310 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 LYVE1Q9Y5Y7 322 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 SEC16AO15027 2179 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 TRIOO75962 3097 aa7.38□□□□□ -1.23
NECAP1-221ENST00000639955 TRBV5-3A0A0A0MS03 114 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 TRBV4-1A0A0J9YWV2 114 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 A0A1W2PRB8 838 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 M0R082 166 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 CDK2AP1O14519 115 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 SCAMP2O15127 329 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 MED26O95402 600 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 ALDH1A1P00352 501 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 CLEC2LP0C7M8 214 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 JUNBP17275 347 aaPredicted RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 IMPA1P29218 277 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 BUD31P41223 144 aaPredicted RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 GPR1P46091 355 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 CRYBA2P53672 197 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 TMEM115Q12893 351 aaPredicted RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 ZNF750Q32MQ0 723 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 MPPE1Q53F39 396 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 C10orf62Q5T681 223 aaPredicted RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 SLC38A4Q969I6 547 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 RNF31Q96EP0 1072 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 PDLIM5Q96HC4 596 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 ZNF300Q96RE9 604 aaPredicted RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 GFM1Q96RP9 751 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 TBX5Q99593 518 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 TTLL2Q9BWV7 592 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 SLIRPQ9GZT3 109 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 CERS4Q9HA82 394 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 NEK6Q9HC98 313 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 ZC4H2Q9NQZ6 224 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 SRRDQ9UH36 339 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 PCDHGB3Q9Y5G1 929 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 H7BY64 318 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 ZW10O43264 779 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 TLX2O43763 284 aaPredicted RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 SLC28A2O43868 658 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 APOA1P02647 267 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 C8GP07360 202 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 POLR2EP19388 210 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 KCNJ10P78508 379 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 SRSF11Q05519 484 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 TARDBPQ13148 414 aaKnown RBP eCLIP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 PTGES3Q15185 160 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 MED27Q6P2C8 311 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 CBLL1Q75N03 491 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 PARP16Q8N5Y8 322 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 GANCQ8TET4 914 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 ZNF480Q8WV37 535 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 S100ZQ8WXG8 99 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 PRAP1Q96NZ9 151 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 TRNT1Q96Q11 434 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 MGLLQ99685 303 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 DOHHQ9BU89 302 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 DUSP21Q9H596 190 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 SEMA3GQ9NS98 782 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 PLXNA4Q9HCM2 1894 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 SLC16A6O15403 523 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 ENTPD6O75354 484 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 CXCL14O95715 111 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 GASTP01350 101 aa7.37□□□□□ -1.23
NECAP1-221ENST00000639955 RPLP0P05388 317 aaKnown RBP7.37□□□□□ -1.23
NECAP1-221ENST00000639955 GABARAPL2P60520 117 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms