RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 NOX4Q9NPH5 578 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 HEBP1Q9NRV9 189 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 HIF1ANQ9NWT6 349 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 YIPF1Q9Y548 306 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 INSL5Q9Y5Q6 135 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 SNX9Q9Y5X1 595 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PTGDR2Q9Y5Y4 395 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 MYO18BQ8IUG5 2567 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 CRYBG3Q68DQ2 2970 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 HECTD1Q9ULT8 2610 aa2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 NYNRINQ9P2P1 1898 aaKnown RBP2.33□□□□□ -2.04
SMARCB1-208ENST00000634926 PTPRBP23467 1997 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PRRC2CQ9Y520 2896 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CKAP5Q14008 2032 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CSMD2Q7Z408 3487 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CENPEQ02224 2701 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 IGLV5-52A0A0A0MRZ9 124 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SMIM28A0A1B0GU29 152 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PRSS51A0A1B0GVH4 220 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 TTC26A0AVF1 554 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ELOVL7A1L3X0 281 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 OOEPA6NGQ2 149 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 LILRA5A6NI73 299 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 C15orf62A8K5M9 175 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SMTNL1A8MU46 457 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ANKRD66B4E2M5 251 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 I3L4J1 428 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CHADO15335 359 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 AKAP3O75969 853 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 WISP2O76076 250 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PPP1R3DO95685 299 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PIGRP01833 764 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 RETP07949 1114 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 VIMP08670 466 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PSMC3P17980 439 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ATF6P18850 670 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CYP11B2P19099 503 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PTPN3P26045 913 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SSTR2P30874 369 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CORO1AP31146 461 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 OR1D2P34982 312 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 HNF4AP41235 474 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 BRCC3P46736 316 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF131P52739 623 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CD81P60033 236 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ERVFC1-1P60608 527 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 POLR2LP62875 67 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF155Q12901 538 aaPredicted RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SRSF5Q13243 272 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 DHX34Q14147 1143 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 TFDP1Q14186 410 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ZBTB6Q15916 424 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 MAPK6Q16659 721 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CDO1Q16878 200 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SMU1Q2TAY7 513 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 GLRA4Q5JXX5 417 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PPM1LQ5SGD2 360 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 STXBP5Q5T5C0 1151 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ATF7IP2Q5U623 682 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 TPGS2Q68CL5 300 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 TRNP1Q6NT89 227 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF852Q6ZMS4 543 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 MEX3BQ6ZN04 569 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 GBP6Q6ZN66 633 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF704Q6ZNC4 412 aaPredicted RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 RAPH1Q70E73 1250 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 OTUD6AQ7L8S5 288 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 DSG4Q86SJ6 1040 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 MAP7D3Q8IWC1 876 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 MFSD6LQ8IWD5 586 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 RNF113BQ8IZP6 322 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 C1orf87Q8N0U7 546 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CHCHD4Q8N4Q1 142 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 C10orf53Q8N6V4 93 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF611Q8N823 705 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 PRR26Q8N8Z3 221 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 NHLRC2Q8NBF2 726 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 LEMD2Q8NC56 503 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 TMEM161BQ8NDZ6 487 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 OR52I2Q8NH67 350 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 FAM216AQ8WUB2 273 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ING5Q8WYH8 240 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 TANKQ92844 425 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SMARCD2Q92925 531 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 C18orf25Q96B23 403 aaPredicted RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 MTERF3Q96E29 417 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CCDC43Q96MW1 224 aaKnown RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SFXN2Q96NB2 322 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 ZNF582Q96NG8 517 aaPredicted RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CSF3RQ99062 836 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CPNE1Q99829 537 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SLX1AQ9BQ83 275 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 BTBD10Q9BSF8 475 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 KATNB1Q9BVA0 655 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 FNDC11Q9BVV2 318 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 CCSER1Q9C0I3 900 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 DPAGT1Q9H3H5 408 aa2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 MMADHCQ9H3L0 296 aaPredicted RBP2.32□□□□□ -2.04
SMARCB1-208ENST00000634926 SLA2Q9H6Q3 261 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms