RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 KRT20P35900 424 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 NPRL3Q12980 569 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 CLCA4Q14CN2 919 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 TEAD4Q15561 434 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 ADPRMQ3LIE5 342 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 TMEM31Q5JXX7 168 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 PRSS48Q7RTY5 328 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 TSEN54Q7Z6J9 526 aaKnown RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 C1orf210Q8IVY1 113 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 ATG16L2Q8NAA4 619 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 FBXO15Q8NCQ5 510 aaPredicted RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 GOT1L1Q8NHS2 421 aaPredicted RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 MYOCQ99972 504 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 AKIP1Q9NQ31 210 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 PRMT8Q9NR22 394 aaPredicted RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 ADPRHL2Q9NX46 363 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 VPS4AQ9UN37 437 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 PLXND1Q9Y4D7 1925 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 CLDN25C9JDP6 229 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 SUV39H1O43463 412 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 OCM2P0CE71 109 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 OCMP0CE72 109 aaPredicted RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 MVDP53602 400 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 RPP38P78345 283 aaKnown RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 TMEM115Q12893 351 aaPredicted RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 ZNF846Q147U1 533 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 SMN1Q16637 294 aaKnown RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 TMEM52BQ4KMG9 183 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 TSSK4Q6SA08 328 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 DTWD2Q8NBA8 298 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 C11orf65Q8NCR3 313 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 ZNF540Q8NDQ6 660 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 IPCEF1Q8WWN9 437 aaPredicted RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 NEIL2Q969S2 332 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 WDR34Q96EX3 536 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 TPD52L3Q96J77 140 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 HRASLS5Q96KN8 279 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 RHNO1Q9BSD3 238 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 DOHHQ9BU89 302 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 BHLHE41Q9C0J9 482 aaPredicted RBP16.68■□□□□ 0.26
FAM3A-222ENST00000621967 ACOT13Q9NPJ3 140 aa16.68■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3DA0A087WVF3 549 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3IA0A087WXS9 549 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3EA0A087X179 549 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3KA0A087X1G2 549 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 FAM86C2PA6NEL3 165 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3FA6NER0 549 aaPredicted RBP16.67■□□□□ 0.26
FAM3A-222ENST00000621967 MGAT4DA6NG13 374 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 LRRC72A6NJI9 287 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3LB9A6J9 549 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 MAN1A2O60476 641 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 MMP20O60882 483 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 FAM20BO75063 409 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 IGLV3-19P01714 112 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3HP0C7X1 549 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 ACSL1P33121 698 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 RXRGP48443 463 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 RPS13P62277 151 aaKnown RBP16.67■□□□□ 0.26
FAM3A-222ENST00000621967 PHEXP78562 749 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 OCA2Q04671 838 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 RGS21Q2M5E4 152 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 ZNF385BQ569K4 471 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3GQ6DHY5 549 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3CQ6IPX1 549 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 MED27Q6P2C8 311 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 LIPIQ6XZB0 460 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 P2RY8Q86VZ1 359 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 TBC1D3Q8IZP1 549 aaPredicted RBP16.67■□□□□ 0.26
FAM3A-222ENST00000621967 APH1BQ8WW43 257 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 RLN3Q8WXF3 142 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 SPACA7Q96KW9 195 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 IRAK4Q9NWZ3 460 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 COQ6Q9Y2Z9 468 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 PCDHGB3Q9Y5G1 929 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 KCNE2Q9Y6J6 123 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 CACNA1IQ9P0X4 2223 aa16.67■□□□□ 0.26
FAM3A-222ENST00000621967 PSMD11O00231 422 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 PCDH7O60245 1069 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 LZTS3O60299 673 aaPredicted RBP16.66■□□□□ 0.26
FAM3A-222ENST00000621967 PCDHGA12O60330 932 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 SEMA4FO95754 770 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 C6P13671 934 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 CSNK2BP67870 215 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.66■□□□□ 0.26
FAM3A-222ENST00000621967 C10orf62Q5T681 223 aaPredicted RBP16.66■□□□□ 0.26
FAM3A-222ENST00000621967 SLCO6A1Q86UG4 719 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 NLRP8Q86W28 1048 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 ENTHD1Q8IYW4 607 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 NAGSQ8N159 534 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 MAL2Q969L2 176 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 REPS1Q96D71 796 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 TOE1Q96GM8 510 aaKnown RBP16.66■□□□□ 0.26
FAM3A-222ENST00000621967 FOPNLQ96NB1 174 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 WDR12Q9GZL7 423 aaKnown RBP16.66■□□□□ 0.26
FAM3A-222ENST00000621967 HMG20AQ9NP66 347 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 GPATCH2Q9NW75 528 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 GULP1Q9UBP9 304 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 PCDHGA6Q9Y5G7 932 aa16.66■□□□□ 0.26
FAM3A-222ENST00000621967 NUMA1Q14980 2115 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms