RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MAP4K5Q9Y4K4 846 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 PCDHB7Q9Y5E2 793 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 TRBC2A0A5B9 178 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 HYKKA2RU49 373 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 TLR4O00206 839 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 WWP2O00308 870 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 SGTAO43765 313 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 ALX3O95076 343 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 CYP17A1P05093 508 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 ITGB7P26010 798 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 SPINT3P49223 89 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 LMAN2Q12907 356 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 ASAH1Q13510 395 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 LARS2Q15031 903 aaKnown RBP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 ZNF630Q2M218 657 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 MPEG1Q2M385 716 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 LEXMQ3ZCV2 418 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 GLYR1Q49A26 553 aaPredicted RBP18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 CCSMST1Q4G0I0 132 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 SLC34A3Q8N130 599 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 CACTIN-AS1Q8N1I8 211 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 OR5AK3PQ8NH89 298 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 FOXJ1Q92949 421 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 DOCK6Q96HP0 2047 aa18.71■□□□□ 0.59
PDLIM3-212ENST00000620787 KPNA5O15131 536 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 HBQ1P09105 142 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 PSMA1P25786 263 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 CST5P28325 142 aaPredicted RBP18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SLC5A12Q1EHB4 618 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 Q5BKY6 102 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 LRRC73Q5JTD7 316 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TMEM201Q5SNT2 666 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 MEDAGQ5VYS4 303 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 OTOP2Q7RTS6 562 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 WDR53Q7Z5U6 358 aaPredicted RBP18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TRIM69Q86WT6 500 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 KLHL6Q8WZ60 621 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TMEM80Q96HE8 168 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SLC22A4Q9H015 551 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 RACGAP1Q9H0H5 632 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SLA2Q9H6Q3 261 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 RANGRFQ9HD47 186 aaPredicted RBP18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 FAM8A1Q9UBU6 413 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 REV1Q9UBZ9 1251 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 KCND3Q9UK17 655 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 OBSL1O75147 1896 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TMEM202A6NGA9 273 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TNFRSF10AO00220 468 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 FFAR1O14842 300 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TPST2O60704 377 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 PSIP1O75475 530 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SLCO2B1O94956 709 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 IFNA14P01570 189 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 ARAFP10398 606 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SRCP12931 536 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 FEN1P39748 380 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 MC1RQ01726 317 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 CHRNEQ04844 493 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SCN1BQ07699 218 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 ZNF763Q0D2J5 394 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TAF12Q16514 161 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TRIM60Q495X7 471 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SNAP47Q5SQN1 464 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TRIM40Q6P9F5 258 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 ZNF438Q7Z4V0 828 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TMEM150AQ86TG1 271 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 NOXA1Q86UR1 476 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 OR7G1Q8NGA0 311 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SLC6A18Q96N87 628 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 MIXL1Q9H2W2 232 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 ELAC1Q9H777 363 aaKnown RBP18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 PRM3Q9NNZ6 103 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 NDOR1Q9UHB4 597 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 RAB23Q9ULC3 237 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 SNX7Q9UNH6 387 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 CASP8AP2Q9UKL3 1982 aa18.7■□□□□ 0.58
PDLIM3-212ENST00000620787 TRBV4-1A0A0J9YWV2 114 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 NOTOA8MTQ0 251 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 IGFBP1P08833 259 aaPredicted RBP18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 CD70P32970 193 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 STK19P49842 368 aaPredicted RBP18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 RUNX1T1Q06455 604 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 GPAT3Q53EU6 434 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 KLHDC8AQ8IYD2 350 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 RDH10Q8IZV5 341 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 TAGAPQ8N103 731 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 ASZ1Q8WWH4 475 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 TRMT2BQ96GJ1 504 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 FYTTD1Q96QD9 318 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 WRAP53Q9BUR4 548 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 MND1Q9BWT6 205 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 ARHGAP39Q9C0H5 1083 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 SUV39H2Q9H5I1 410 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 RC3H2Q9HBD1 1191 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 NUFIP1Q9UHK0 495 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 BNIP3LO60238 219 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 GPR37L1O60883 481 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 GBAP04062 536 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 IFNW1P05000 195 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms