RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 PROCP04070 461 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 JUNP05412 331 aaKnown RBP5.34□□□□□ -1.56
CPNE3-208ENST00000614678 BSGP35613 385 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 PGDP52209 483 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 BTKQ06187 659 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF33BQ06732 778 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 SLAMF1Q13291 335 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 PWP1Q13610 501 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 E2F2Q14209 437 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 GARNL3Q5VVW2 1013 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 CYB5D1Q6P9G0 228 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 MED25Q71SY5 747 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 LRRC70Q7Z2Q7 622 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 MDGA2Q7Z553 956 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 BEST3Q8N1M1 668 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 APCDD1LQ8NCL9 501 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 OR2L5Q8NG80 312 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 UBTD2Q8WUN7 234 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 ATP6V1E2Q96A05 226 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 ANKRD9Q96BM1 317 aaPredicted RBP5.34□□□□□ -1.56
CPNE3-208ENST00000614678 WDR34Q96EX3 536 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 TGIF2Q9GZN2 237 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 MRPL46Q9H2W6 279 aaKnown RBP5.34□□□□□ -1.56
CPNE3-208ENST00000614678 ATP13A2Q9NQ11 1180 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 TNFRSF10DQ9UBN6 386 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 ANGPTL3Q9Y5C1 460 aa5.34□□□□□ -1.56
CPNE3-208ENST00000614678 PCNX3Q9H6A9 2034 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 IGKV3D-11A0A0A0MRZ8 115 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 A0A0G2JMM0 328 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 A0A1W2PPB8 328 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 A0A1W2PRS3 328 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 KIR3DP1A8MWS1 328 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 PRPF4O43172 522 aaKnown RBP eCLIP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 PRMT3O60678 531 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 LRATO95237 230 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 S100BP04271 92 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 RELAQ04206 551 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 CLCQ05315 142 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF844Q08AG5 666 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 SLC13A2Q13183 592 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 NAB1Q13506 487 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 KHDRBS2Q5VWX1 349 aaKnown RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 MED27Q6P2C8 311 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 CRLF3Q8IUI8 442 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 LAS2Q8IYD9 372 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 ZNF483Q8TF39 744 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 APIPQ96GX9 242 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 PPP1R36Q96LQ0 422 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 FAM111AQ96PZ2 611 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 LMF1Q96S06 567 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 COPG2Q9UBF2 871 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 LOC102723996A0A087X1L8 192 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 LYPLA1O75608 230 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 SORBS2O94875 1100 aaKnown RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 FKBP9O95302 570 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 ALPPP05187 535 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 KLK1P06870 262 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 CT62P0C5K7 136 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 EFNA1P20827 205 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 GPR85P60893 370 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 HSF1Q00613 529 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 RGS1Q08116 209 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 PCLAFQ15004 111 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 HERC3Q15034 1050 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 DEPDC1Q5TB30 811 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 GRHL2Q6ISB3 625 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 NDUFAF7Q7L592 441 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 RAB43Q86YS6 212 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 EFCAB3Q8N7B9 438 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 TRPV3Q8NET8 790 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 PTPMT1Q8WUK0 201 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 MRPL57Q9BQC6 102 aaKnown RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 EHD1Q9H4M9 534 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 CNOT10Q9H9A5 744 aaKnown RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 SEMA3GQ9NS98 782 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 DTX4Q9Y2E6 619 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 PLIN3O60664 434 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 IPO13O94829 963 aaKnown RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 TUBB4AP04350 444 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 HIST1H1TP22492 207 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 TPP2P29144 1249 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 CASP2P42575 452 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 CCNG1P51959 295 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 GALNT1Q10472 559 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 INPP5JQ15735 1006 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 NNATQ16517 81 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 NDUFA9Q16795 377 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 RNFT1Q5M7Z0 435 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 TIFABQ6ZNK6 161 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 NFAM1Q8NET5 270 aaPredicted RBP5.33□□□□□ -1.56
CPNE3-208ENST00000614678 ADCY4Q8NFM4 1077 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 OR2T11Q8NH01 316 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 DNAJB14Q8TBM8 379 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 NACC2Q96BF6 587 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 MVB12AQ96EY5 273 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 EGLN2Q96KS0 407 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 ZIM3Q96PE6 472 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 CENPHQ9H3R5 247 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 TUBB1Q9H4B7 451 aa5.33□□□□□ -1.56
CPNE3-208ENST00000614678 DOPEY1Q5JWR5 2465 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms