RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 TRIM42Q8IWZ5 723 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 ZNF595Q8IYB9 648 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 KIRREL3Q8IZU9 778 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 METTL4Q8N3J2 472 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 PLPP5Q8NEB5 264 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 C7orf57Q8NEG2 295 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 MGARPQ8TDB4 240 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 HBEGFQ99075 208 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 ARHGAP9Q9BRR9 750 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 RBCK1Q9BYM8 510 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 MLXIPLQ9NP71 852 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 LANCL2Q9NS86 450 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 LYARQ9NX58 379 aaKnown RBP13.44□□□□□ -0.26
CTSA-219ENST00000607841 P4HTMQ9NXG6 502 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 LHX6Q9UPM6 363 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 TRAF6Q9Y4K3 522 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 MMACHCQ9Y4U1 282 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 HS3ST3B1Q9Y662 390 aa13.44□□□□□ -0.26
CTSA-219ENST00000607841 ANKRD11Q6UB99 2663 aaPredicted RBP13.43□□□□□ -0.26
CTSA-219ENST00000607841 SLC28A1O00337 649 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 GUCY1B2O75343 617 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 CPN2P22792 545 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 SERPINB3P29508 390 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 BUD31P41223 144 aaPredicted RBP13.43□□□□□ -0.26
CTSA-219ENST00000607841 HTR6P50406 440 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 HSD17B7P56937 341 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 WDR4P57081 412 aaKnown RBP13.43□□□□□ -0.26
CTSA-219ENST00000607841 ABCE1P61221 599 aaKnown RBP13.43□□□□□ -0.26
CTSA-219ENST00000607841 STX3Q13277 289 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 ATP1A4Q13733 1029 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 NSDHLQ15738 373 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 TBR1Q16650 682 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 SPIN4Q56A73 249 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 TTMPQ5BVD1 217 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 SH2D4BQ5SQS7 431 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 CCNYL2Q5T2Q4 361 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 KANK2Q63ZY3 851 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 CLEC6AQ6EIG7 209 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 TMEM205Q6UW68 189 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 KIRREL2Q6UWL6 708 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 QSOX2Q6ZRP7 698 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 RNF165Q6ZSG1 346 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 TRIM46Q7Z4K8 759 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 GPR180Q86V85 440 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 APLFQ8IW19 511 aaPredicted RBP13.43□□□□□ -0.26
CTSA-219ENST00000607841 RAB3IL1Q8TBN0 382 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 PTCHD1Q96NR3 888 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 SORBS1Q9BX66 1292 aaKnown RBP13.43□□□□□ -0.26
CTSA-219ENST00000607841 ZNF717Q9BY31 904 aaPredicted RBP13.43□□□□□ -0.26
CTSA-219ENST00000607841 MRPL1Q9BYD6 325 aaKnown RBP13.43□□□□□ -0.26
CTSA-219ENST00000607841 ACPTQ9BZG2 426 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 PFDN4Q9NQP4 134 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 PRDM9Q9NQV7 894 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 KCMF1Q9P0J7 381 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 KCNMB2Q9Y691 235 aa13.43□□□□□ -0.26
CTSA-219ENST00000607841 LOC102723996A0A087X1L8 192 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 A0A0A6YYD5 115 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 ARGFXA6NJG6 315 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 FAM227AF5H4B4 570 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 ERVH48-1M5A8F1 160 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 CYR61O00622 381 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 SOCS6O14544 535 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 RGS14O43566 566 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 EEDO75530 441 aaKnown RBP13.42□□□□□ -0.26
CTSA-219ENST00000607841 KLK1P06870 262 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 FAM58BPP0C7Q3 252 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 BGNP21810 368 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 SLC1A6P48664 564 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 HMGCS1Q01581 520 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 RHAGQ02094 409 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 TBL3Q12788 808 aaKnown RBP13.42□□□□□ -0.26
CTSA-219ENST00000607841 SLC13A2Q13183 592 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 SPDYAQ5MJ70 313 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 ATG16L1Q676U5 607 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 FAAH2Q6GMR7 532 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 SCIMPQ6UWF3 145 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 COMMD6Q7Z4G1 85 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 EFCAB3Q8N7B9 438 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 FAM47BQ8NA70 645 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 CLEC1AQ8NC01 280 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 OR11G2Q8NGC1 345 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 EXTL1Q92935 676 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 METTL2AQ96IZ6 378 aaKnown RBP13.42□□□□□ -0.26
CTSA-219ENST00000607841 CCT7Q99832 543 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 MAPKAP1Q9BPZ7 522 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 ILKAPQ9H0C8 392 aaPredicted RBP13.42□□□□□ -0.26
CTSA-219ENST00000607841 ING2Q9H160 280 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 WDR41Q9HAD4 459 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 TNFRSF12AQ9NP84 129 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 ATP13A2Q9NQ11 1180 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 PRTFDC1Q9NRG1 225 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 FBXW2Q9UKT8 454 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.42□□□□□ -0.26
CTSA-219ENST00000607841 FIS1Q9Y3D6 152 aa13.42□□□□□ -0.26
CTSA-219ENST00000607841 SEC16AO15027 2179 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 NSG1A0A0A6YYJ2 146 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 A0A1W2PQ72 361 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 ATP8B1O43520 1251 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 CTNSO60931 367 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 RSL1D1O76021 490 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms