RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 ZBTB26Q9HCK0 441 aa13.23□□□□□ -0.29
CLPTM1-210ENST00000589158 TEKT2Q9UIF3 430 aa13.23□□□□□ -0.29
CLPTM1-210ENST00000589158 FBXW2Q9UKT8 454 aa13.23□□□□□ -0.29
CLPTM1-210ENST00000589158 TSC22D4Q9Y3Q8 395 aa13.23□□□□□ -0.29
CLPTM1-210ENST00000589158 MMACHCQ9Y4U1 282 aa13.23□□□□□ -0.29
CLPTM1-210ENST00000589158 IGKV3D-11A0A0A0MRZ8 115 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 TCRBV16S1A1N1A0A5B0 115 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 DYTNA2CJ06 578 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 DLX3O60479 287 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 SUPT7LO94864 414 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 OTCP00480 354 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 F10P00742 488 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 ATP5F1P24539 256 aaPredicted RBP13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 HNRNPFP52597 415 aaKnown RBP13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 SLC26A5P58743 744 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 HERVK_113P63132 956 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 ZNF33BQ06732 778 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 IFT88Q13099 833 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 TRAF3Q13114 568 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 PRR30Q53SZ7 412 aaPredicted RBP13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 SGO1Q5FBB7 561 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 FRG2Q64ET8 278 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 FCRLBQ6BAA4 426 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 WDR93Q6P2C0 686 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 CLNKQ7Z7G1 428 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 CUZD1Q86UP6 607 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 ATCAYQ86WG3 371 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 CATSPER1Q8NEC5 780 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 OR4F6Q8NGB9 312 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 OR2W6PQ8NHA6 318 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 WDR20Q8TBZ3 569 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 TRPC4APQ8TEL6 797 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 MIB2Q96AX9 1013 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 FRG2BQ96QU4 278 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 CSF3RQ99062 836 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 MAPKAP1Q9BPZ7 522 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 ERVK-6Q9BXR3 956 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 LYRM4Q9HD34 91 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 MMP25Q9NPA2 562 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 PNO1Q9NRX1 252 aaKnown RBP13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 STMN3Q9NZ72 180 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 CCDC88CQ9P219 2028 aa13.22□□□□□ -0.29
CLPTM1-210ENST00000589158 FOXE1O00358 373 aaPredicted RBP13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CYR61O00622 381 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 PPP6CO00743 305 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 PLPP1O14494 284 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CDH16O75309 829 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 GLRA3O75311 464 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 VPS4BO75351 444 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CPN2P22792 545 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 TSFMP43897 325 aaKnown RBP13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CCT5P48643 541 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 TAS2R50P59544 299 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CLCQ05315 142 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 STX4Q12846 297 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CUL3Q13618 768 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 ZNF169Q14929 603 aaPredicted RBP13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 TLR1Q15399 786 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 ERCC6LQ2NKX8 1250 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 UNC50Q53HI1 259 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 ZNF678Q5SXM1 525 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 EMBQ6PCB8 327 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 SLC22A9Q8IVM8 553 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 SCUBE1Q8IWY4 988 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CISD2Q8N5K1 135 aaKnown RBP13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 AENQ8WTP8 325 aaKnown RBP13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 ZNF354BQ96LW1 612 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 C1QTNF3Q9BXJ4 246 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 ELOVL6Q9H5J4 265 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 CLMPQ9H6B4 373 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 KCMF1Q9P0J7 381 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 VPS4AQ9UN37 437 aa13.21□□□□□ -0.29
CLPTM1-210ENST00000589158 TNRC6AQ8NDV7 1962 aaKnown RBP13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 MED13Q9UHV7 2174 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 A0A1B0GTL3 188 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 MYOCOSA0A1B0GUC4 107 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 SAGE2PA6NJ88 616 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 COPEO14579 308 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 CTNSO60931 367 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 MYO1DO94832 1006 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 SCELO95171 688 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 ETHE1O95571 254 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 WDPCPO95876 746 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 IFNA16P05015 189 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 MYL2P10916 166 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 IMPDH1P20839 514 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 PPP2R1BP30154 601 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 PRKAA2P54646 552 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 RASA2Q15283 850 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 GGTA1PQ4G0N0 100 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 ACER2Q5QJU3 275 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 LETMD1Q6P1Q0 360 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 GPR180Q86V85 440 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 CRLF3Q8IUI8 442 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 KIF2BQ8N4N8 673 aa13.2□□□□□ -0.3
CLPTM1-210ENST00000589158 SLC5A8Q8N695 610 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms