RNA–Protein interactions for RNA: ENST00000582356.5

ACADVL-229, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 4

Gene ACADVL, Length 633 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-229	ENST00000582356	ATP5A1	P25705	553 aa	Known RBP	21.32	■■□□□ 1
ACADVL-229	ENST00000582356	ARL1	P40616	181 aa	Predicted RBP	21.32	■■□□□ 1
ACADVL-229	ENST00000582356	SSR2	P43308	183 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	HNRNPF	P52597	415 aa	Known RBP	21.32	■■□□□ 1
ACADVL-229	ENST00000582356	CPSF6	Q16630	551 aa	Known RBP eCLIP	21.32	■■□□□ 1
ACADVL-229	ENST00000582356	AP5B1	Q2VPB7	878 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	DEPDC1	Q5TB30	811 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	CNPY4	Q8N129	248 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	ACOT4	Q8N9L9	421 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	L3MBTL4	Q8NA19	623 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	TMEM52	Q8NDY8	209 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	MTERF1	Q99551	399 aa	Known RBP	21.32	■■□□□ 1
ACADVL-229	ENST00000582356	BARD1	Q99728	777 aa	Known RBP	21.32	■■□□□ 1
ACADVL-229	ENST00000582356	ABI3	Q9P2A4	366 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	PCTP	Q9UKL6	214 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	RNF11	Q9Y3C5	154 aa		21.32	■■□□□ 1
ACADVL-229	ENST00000582356	SHANK1	Q9Y566	2161 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	COL12A1	Q99715	3063 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	OR7A17	O14581	309 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	SCEL	O95171	688 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	CLDN9	O95484	217 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	RAP1GDS1	P52306	607 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	MEP1A	Q16819	746 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	RPUSD3	Q6P087	351 aa	Known RBP	21.31	■■□□□ 1
ACADVL-229	ENST00000582356	LCA5	Q86VQ0	697 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	CRLF3	Q8IUI8	442 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	BEST3	Q8N1M1	668 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	RNF175	Q8N4F7	328 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	OR52B6	Q8NGF0	335 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	ELP5	Q8TE02	316 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	ATP6V1E2	Q96A05	226 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	CCDC77	Q9BR77	488 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	KCMF1	Q9P0J7	381 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	SPACA6	W5XKT8	324 aa		21.31	■■□□□ 1
ACADVL-229	ENST00000582356	CLEC18A	A5D8T8	446 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356		A8MUA0	341 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	MYO1D	O94832	1006 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	TNFRSF8	P28908	595 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	CCNG1	P51959	295 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	RPS13	P62277	151 aa	Known RBP	21.3	■■□□□ 1
ACADVL-229	ENST00000582356	MRPL49	Q13405	166 aa	Known RBP	21.3	■■□□□ 1
ACADVL-229	ENST00000582356	UBAP2L	Q14157	1087 aa	Known RBP	21.3	■■□□□ 1
ACADVL-229	ENST00000582356	NR6A1	Q15406	480 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	TERF2	Q15554	542 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	ZRSR2	Q15696	482 aa	Known RBP	21.3	■■□□□ 1
ACADVL-229	ENST00000582356	CLEC18B	Q6UXF7	455 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	CLNK	Q7Z7G1	428 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	LGI4	Q8N135	537 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	TMEM151A	Q8N4L1	468 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	KIF2B	Q8N4N8	673 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	FAM26E	Q8N5C1	309 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	CLEC18C	Q8NCF0	446 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	NFAM1	Q8NET5	270 aa	Predicted RBP	21.3	■■□□□ 1
ACADVL-229	ENST00000582356	SUN3	Q8TAQ9	357 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	GRHL3	Q8TE85	626 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	RGMA	Q96B86	450 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	NSUN5	Q96P11	429 aa	Known RBP	21.3	■■□□□ 1
ACADVL-229	ENST00000582356	CDK15	Q96Q40	435 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	MAPKAP1	Q9BPZ7	522 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	CLDN16	Q9Y5I7	305 aa		21.3	■■□□□ 1
ACADVL-229	ENST00000582356	SYNDIG1L	A6NDD5	238 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356		A8MT66	165 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	TGFBR3L	H3BV60	316 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	CTNS	O60931	367 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	RPS17	P08708	135 aa	Known RBP	21.29	■■□□□ 1
ACADVL-229	ENST00000582356	SBK3	P0C264	359 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	PTX3	P26022	381 aa	Predicted RBP	21.29	■■□□□ 1
ACADVL-229	ENST00000582356	INA	Q16352	499 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	OR4C11	Q6IEV9	310 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	FAM180A	Q6UWF9	173 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	ACMSD	Q8TDX5	336 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	NPAS2	Q99743	824 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	NTMT1	Q9BV86	223 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	SORBS1	Q9BX66	1292 aa	Known RBP	21.29	■■□□□ 1
ACADVL-229	ENST00000582356	ZBTB26	Q9HCK0	441 aa		21.29	■■□□□ 1
ACADVL-229	ENST00000582356	PNO1	Q9NRX1	252 aa	Known RBP	21.29	■■□□□ 1
ACADVL-229	ENST00000582356	PLPP1	O14494	284 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	MAN1A2	O60476	641 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	PPP2R1B	P30154	601 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	ARFIP1	P53367	373 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	TRAF3	Q13114	568 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	B3GNT7	Q8NFL0	401 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	WDR20	Q8TBZ3	569 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	UBLCP1	Q8WVY7	318 aa	Predicted RBP	21.28	■■□□□ 1
ACADVL-229	ENST00000582356	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	21.28	■■□□□ 1
ACADVL-229	ENST00000582356	ADAP2	Q9NPF8	381 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	SEMA4B	Q9NPR2	832 aa	Predicted RBP	21.28	■■□□□ 1
ACADVL-229	ENST00000582356	TMEM216	Q9P0N5	145 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	TBK1	Q9UHD2	729 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	SCN2A	Q99250	2005 aa		21.28	■■□□□ 1
ACADVL-229	ENST00000582356	CPAMD8	Q8IZJ3	1885 aa		21.27	■■□□□ 1
ACADVL-229	ENST00000582356	BLACE	A4D250	179 aa		21.27	■■□□□ 1
ACADVL-229	ENST00000582356	GOLGA8R	I6L899	631 aa		21.27	■■□□□ 1
ACADVL-229	ENST00000582356	FOXE1	O00358	373 aa	Predicted RBP	21.27	■■□□□ 1
ACADVL-229	ENST00000582356	PRAMEF2	O60811	474 aa		21.27	■■□□□ 1
ACADVL-229	ENST00000582356	CBX6	O95503	412 aa		21.27	■■□□□ 1
ACADVL-229	ENST00000582356	TAC1	P20366	129 aa		21.27	■■□□□ 1
ACADVL-229	ENST00000582356	NEK2	P51955	445 aa		21.27	■■□□□ 1
ACADVL-229	ENST00000582356	SRSF1	Q07955	248 aa	Known RBP eCLIP	21.27	■■□□□ 1
ACADVL-229	ENST00000582356	STX4	Q12846	297 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms