RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 EFCAB3Q8N7B9 438 aa17.77■□□□□ 0.43
COMMD4-213ENST00000565834 TTC29Q8NA56 475 aaPredicted RBP17.77■□□□□ 0.43
COMMD4-213ENST00000565834 SPRTNQ9H040 489 aaPredicted RBP17.77■□□□□ 0.43
COMMD4-213ENST00000565834 IL1RL2Q9HB29 575 aa17.77■□□□□ 0.43
COMMD4-213ENST00000565834 FANCEQ9HB96 536 aa17.77■□□□□ 0.43
COMMD4-213ENST00000565834 CROTQ9UKG9 612 aa17.77■□□□□ 0.43
COMMD4-213ENST00000565834 NAALAD2Q9Y3Q0 740 aa17.77■□□□□ 0.43
COMMD4-213ENST00000565834 EP300Q09472 2414 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-213ENST00000565834 HYKKA2RU49 373 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 FITM1A5D6W6 292 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 OR2B3O76000 313 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 DRD2P14416 443 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 DDX5P17844 614 aaKnown RBP17.76■□□□□ 0.43
COMMD4-213ENST00000565834 SKP1P63208 163 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 C6orf10Q5SRN2 563 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 DHDDSQ86SQ9 333 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 PDSS2Q86YH6 399 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 TICAM1Q8IUC6 712 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 RCBTB1Q8NDN9 531 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 GTF2H4Q92759 462 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 ITCHQ96J02 903 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 C10orf90Q96M02 699 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 RAB3IPQ96QF0 476 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-213ENST00000565834 MAPKAP1Q9BPZ7 522 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 BHLHE41Q9C0J9 482 aaPredicted RBP17.76■□□□□ 0.43
COMMD4-213ENST00000565834 PHF11Q9UIL8 331 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 HCN4Q9Y3Q4 1203 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 ATG4BQ9Y4P1 393 aa17.76■□□□□ 0.43
COMMD4-213ENST00000565834 NUP214P35658 2090 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-213ENST00000565834 ZNF860A6NHJ4 632 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 FOXD2O60548 495 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-213ENST00000565834 TBX19O60806 448 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 CBFA2T3O75081 653 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 KCNH1O95259 989 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 NPPAP01160 153 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 NQO1P15559 274 aaKnown RBP17.75■□□□□ 0.43
COMMD4-213ENST00000565834 TGM1P22735 817 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 PGM1P36871 562 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 EMP3P54852 163 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 PSME3P61289 254 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 PLIN5Q00G26 463 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 ZNF385BQ569K4 471 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 PHF19Q5T6S3 580 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 ANXA8L1Q5VT79 327 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 NIPAL1Q6NVV3 410 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 ANKRD46Q86W74 232 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 SLITRK4Q8IW52 837 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 GPR135Q8IZ08 494 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 ARHGAP24Q8N264 748 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 VPS37AQ8NEZ2 397 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 OR1L3Q8NH93 324 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 LRRC58Q96CX6 371 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 CDC6Q99741 560 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 THTPAQ9BU02 230 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 ENAMQ9NRM1 1142 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 FGF21Q9NSA1 209 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 SERTAD3Q9UJW9 196 aa17.75■□□□□ 0.43
COMMD4-213ENST00000565834 A0A1W2PR48 441 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 FXYD1O00168 92 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 PROM1O43490 865 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 AIFM1O95831 613 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 ITGA1P56199 1179 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 WNT3P56703 355 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 ACY1Q03154 408 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 FOXM1Q08050 763 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 RUNX2Q13950 521 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 COL9A2Q14055 689 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 FAM53BQ14153 422 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 MUM1Q2TAK8 710 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 OR9A4Q8NGU2 314 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 ZNF764Q96H86 408 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 HOPXQ9BPY8 73 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 SLC39A3Q9BRY0 314 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 LYRM4Q9HD34 91 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 EHD3Q9NZN3 535 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 DAPP1Q9UN19 280 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 MAN2B2Q9Y2E5 1009 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 RRP15Q9Y3B9 282 aaKnown RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 PCDHGA7Q9Y5G6 932 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 PCDHA9Q9Y5H5 950 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 PRSS51A0A1B0GVH4 220 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 C1orf226A1L170 272 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 H3BMH7 237 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 SGK494L7N484 410 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 SCN2BO60939 215 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 MED26O95402 600 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 NR2F6P10588 404 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 CPN2P22792 545 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 BUD31P41223 144 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 LIM2P55344 173 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 OLR1P78380 273 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 LRRC74AQ0VAA2 488 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 TRA2AQ13595 282 aaKnown RBP eCLIP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 CAPRIN1Q14444 709 aaKnown RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 FAM214AQ32MH5 1076 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 C18orf63Q68DL7 685 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 PRMT9Q6P2P2 845 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 TLDC1Q6P9B6 456 aa17.74■□□□□ 0.43
COMMD4-213ENST00000565834 BNC2Q6ZN30 1099 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-213ENST00000565834 FAM47BQ8NA70 645 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms