RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 RAB9BQ9NP90 201 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 CHST11Q9NPF2 352 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 FZD3Q9NPG1 666 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 P2RX2Q9UBL9 471 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 LHX3Q9UBR4 397 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 FZD10Q9ULW2 581 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 LINC00854A0A1B0GVQ3 168 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ANKRD61A6NGH8 418 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 A6NNC1 897 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 SPECC1L-ADORA2AF8WAN1 911 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TMEM178BH3BS89 294 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 CCSO14618 274 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 SLC22A2O15244 555 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TRIM3O75382 744 aaPredicted RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 MTRF1O75570 445 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 SCGNO76038 276 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 WISP2O76076 250 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ANP32DO95626 131 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TXNDC12O95881 172 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 OTCP00480 354 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 IGHEP01854 428 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 FAM106CPP0CH98 169 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 CHRNB1P11230 501 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 B4GALT1P15291 398 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 PAX7P23759 505 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 PPP2R1AP30153 589 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 NF2P35240 595 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 CDH4P55283 916 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 NLRP11P59045 1033 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 HERVK_113P63132 956 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ERVK-8P63133 956 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 CNTN2Q02246 1040 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ID2Q02363 134 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ZNF415Q09FC8 603 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TRAP1Q12931 704 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 FOXI1Q12951 378 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ZBTB17Q13105 803 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 MFAP5Q13361 173 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 HNRNPDQ14103 355 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 DOC2AQ14183 400 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ZNF234Q14588 700 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 EXOSC7Q15024 291 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 WDR43Q15061 677 aaKnown RBP eCLIP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TRIP10Q15642 601 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 INPP5JQ15735 1006 aaPredicted RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 PCK2Q16822 640 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ACSF3Q4G176 576 aaPredicted RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 BCL7AQ4VC05 210 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 PDLIM3Q53GG5 364 aaPredicted RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 EFHC1Q5JVL4 640 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TAF3Q5VWG9 929 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 CTR9Q6PD62 1173 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 BLOC1S2Q6QNY1 142 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 CCNI2Q6ZMN8 369 aaPredicted RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 BZW1Q7L1Q6 419 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 COX8CQ7Z4L0 72 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 LHFPL4Q7Z7J7 247 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 SLC22A16Q86VW1 577 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 C17orf64Q86WR6 236 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 RCOR2Q8IZ40 523 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 RNF113BQ8IZP6 322 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 PDCL2Q8N4E4 241 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 COMMD1Q8N668 190 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 SYT8Q8NBV8 401 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TRPV1Q8NER1 839 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 HMGCLL1Q8TB92 370 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 PNPT1Q8TCS8 783 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 P3H4Q92791 437 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 MCHR2Q969V1 340 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 MCUR1Q96AQ8 359 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ABHD8Q96I13 439 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 PRICKLE1Q96MT3 831 aaPredicted RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 VSTM2LQ96N03 204 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 CHP1Q99653 195 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 UBAC1Q9BSL1 405 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 RAB11FIP5Q9BXF6 653 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 ERVK-6Q9BXR3 956 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 IQCGQ9H095 443 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TDRD3Q9H7E2 651 aaKnown RBP3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 SGK2Q9HBY8 427 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 RNF6Q9Y252 685 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TNIKQ9UKE5 1360 aa3.97□□□□□ -1.77
AC055878.1-201ENST00000531858 TEX13DA0A0J9YY54 714 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ZCWPW2A0A1B0GU75 182 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 A0A1W2PN81 502 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 CCDC162PA2VCL2 907 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 TCP11X1B4DZS4 312 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 NPIPA2E9PIF3 369 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 H3BTX0 84 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 KIF2AO00139 706 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ARPC3O15145 178 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 PLSCR1O15162 318 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 AKAP8O43823 692 aaKnown RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 KRT33AO76009 404 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 KRT6AP02538 564 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 IVLP07476 585 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 TROVE2P10155 538 aaKnown RBP eCLIP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 ODC1P11926 461 aa3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 POLR2CP19387 275 aaPredicted RBP3.96□□□□□ -1.78
AC055878.1-201ENST00000531858 CHRNA7P36544 502 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms