RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 PPIEQ9UNP9 301 aaKnown RBP11.92□□□□□ -0.5
MCPH1-202ENST00000519221 PCDHGA11Q9Y5H2 935 aa11.92□□□□□ -0.5
MCPH1-202ENST00000519221 DNAJC13O75165 2243 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 WIPF3A6NGB9 483 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 CYR61O00622 381 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 ABHD2P08910 425 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 CERS1P27544 350 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 LIM2P55344 173 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 SLC13A2Q13183 592 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 TUBA3CQ13748 450 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 ZNF766Q5HY98 468 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 TECRLQ5HYJ1 363 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 DEPDC1Q5TB30 811 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 LGSNQ5TDP6 509 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 KHDRBS2Q5VWX1 349 aaKnown RBP11.91□□□□□ -0.5
MCPH1-202ENST00000519221 ADNP2Q6IQ32 1131 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 TUBA3EQ6PEY2 450 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 RPS19BP1Q86WX3 136 aaKnown RBP11.91□□□□□ -0.5
MCPH1-202ENST00000519221 AMER2Q8N7J2 671 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 MDS2Q8NDY4 140 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 B3GNT7Q8NFL0 401 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 REPS1Q96D71 796 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 TRIM44Q96DX7 344 aaPredicted RBP11.91□□□□□ -0.5
MCPH1-202ENST00000519221 TAAR6Q96RI8 345 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 NPAS2Q99743 824 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 CENPKQ9BS16 269 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 ADAP2Q9NPF8 381 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 SLC5A6Q9Y289 635 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 SPACA6W5XKT8 324 aa11.91□□□□□ -0.5
MCPH1-202ENST00000519221 UTP20O75691 2785 aaKnown RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 GABRR3A8MPY1 467 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 H0YIV9 168 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 FCHO1O14526 889 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CTNSO60931 367 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 F10P00742 488 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 LDLRP01130 860 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 PCNAP12004 261 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CD46P15529 392 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 HIST1H1TP22492 207 aaPredicted RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 ATP5A1P25705 553 aaKnown RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CD96P40200 585 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CLCN2P51788 898 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 PHEXP78562 749 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 NOTCH2Q04721 2471 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 GTF2H2Q13888 395 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 SERTAD2Q14140 314 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 ELAVL1Q15717 326 aaKnown RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 AP5B1Q2VPB7 878 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 C4orf17Q53FE4 359 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 UBAP2Q5T6F2 1119 aaKnown RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CROCCQ5TZA2 2017 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 GTF2H2CQ6P1K8 395 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 TRMT10CQ7L0Y3 403 aaKnown RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 UBE3DQ7Z6J8 389 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 TMEM132CQ8N3T6 1108 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 ACOT4Q8N9L9 421 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 FAM47BQ8NA70 645 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 TMEM178AQ8NBL3 297 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 APCDD1LQ8NCL9 501 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 DCAKDQ8WVC6 231 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 VMP1Q96GC9 406 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 SCMH1Q96GD3 660 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 C5orf34Q96MH7 638 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 DEFB126Q9BYW3 111 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CDCP1Q9H5V8 836 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 TRIM45Q9H8W5 580 aaPredicted RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 ACTR8Q9H981 624 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 PRM3Q9NNZ6 103 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 MS4A12Q9NXJ0 267 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 PSD3Q9NYI0 1048 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 KCMF1Q9P0J7 381 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CPSF2Q9P2I0 782 aaKnown RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 ERRFI1Q9UJM3 462 aaPredicted RBP11.9□□□□□ -0.5
MCPH1-202ENST00000519221 PPT2Q9UMR5 302 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CLDN16Q9Y5I7 305 aa11.9□□□□□ -0.5
MCPH1-202ENST00000519221 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 EML6Q6ZMW3 1958 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 UNC79Q9P2D8 2635 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 TRIM49D1C9J1S8 452 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 POC1B-GALNT4F8VUJ3 575 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 STX16-NPEPL1H3BU86 382 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 STX16O14662 325 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 MYO1DO94832 1006 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 MLYCDO95822 493 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 TGFB1P01137 390 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 STSP08842 583 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 SNRPAP09012 282 aaKnown RBP11.89□□□□□ -0.51
MCPH1-202ENST00000519221 PTX3P26022 381 aaPredicted RBP11.89□□□□□ -0.51
MCPH1-202ENST00000519221 TRHRP34981 398 aaPredicted RBP11.89□□□□□ -0.51
MCPH1-202ENST00000519221 SSR2P43308 183 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 TDGF1P3P51864 188 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 HNRNPFP52597 415 aaKnown RBP11.89□□□□□ -0.51
MCPH1-202ENST00000519221 PER3P56645 1201 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 MLF1P58340 268 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 OC90Q02509 493 aaPredicted RBP11.89□□□□□ -0.51
MCPH1-202ENST00000519221 BIKQ13323 160 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 OR1C1Q15619 314 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 C10orf62Q5T681 223 aaPredicted RBP11.89□□□□□ -0.51
MCPH1-202ENST00000519221 ZNF793Q6ZN11 406 aa11.89□□□□□ -0.51
MCPH1-202ENST00000519221 GOLGA7Q7Z5G4 137 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms