RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 RPTNQ6XPR3 784 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SNX20Q7Z614 316 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 ZC3HC1Q86WB0 502 aaKnown RBP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 PDPRQ8NCN5 879 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 NFKBIDQ8NI38 313 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 RDH11Q8TC12 318 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SLC7A6OSQ96CW6 309 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 ZFYVE19Q96K21 471 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TSNARE1Q96NA8 513 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 KLHL32Q96NJ5 620 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SPATA5L1Q9BVQ7 753 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 KCNK12Q9HB15 430 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 DYRK4Q9NR20 520 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 THAP1Q9NVV9 213 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SMOXQ9NWM0 555 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TAS2R10Q9NYW0 307 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 LNPEPQ9UIQ6 1025 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 SARDHQ9UL12 918 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 EMCNQ9ULC0 261 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 TMCO1Q9UM00 188 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.82□□□□□ -1.32
CLCN3-206ENST00000507875 PCDHGA5Q9Y5G8 931 aa6.82□□□□□ -1.32
CLCN3-206ENST00000507875 MEX3AA1L020 520 aaKnown RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 CCDC162PA2VCL2 907 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 FITM1A5D6W6 292 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 OTOL1A6NHN0 477 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PLIN3O60664 434 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 TOX4O94842 621 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 HAUS5O94927 633 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PIGNO95427 931 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 GOT2P00505 430 aaKnown RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 QDPRP09417 244 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PRKACBP22694 351 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 TEAD1P28347 426 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PTPN4P29074 926 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 GCKP35557 465 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 NAA20P61599 178 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 TMEM115Q12893 351 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 STX3Q13277 289 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 IKZF1Q13422 519 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 EOGTQ5NDL2 527 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 CLVS2Q5SYC1 327 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF385CQ66K41 422 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ETV3LQ6ZN32 361 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 LARP4Q71RC2 724 aaKnown RBP eCLIP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ARHGAP22Q7Z5H3 698 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 CRLF3Q8IUI8 442 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 LSMEM2Q8N112 164 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 DENND6BQ8NEG7 585 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 OR4K2Q8NGD2 314 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 DNAJB14Q8TBM8 379 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PDCD6IPQ8WUM4 868 aaKnown RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 FAM131CQ96AQ9 280 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 DTNBP1Q96EV8 351 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 DNAJC1Q96KC8 554 aaKnown RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 AGAP2Q99490 1192 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PINK1Q9BXM7 581 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 C20orf27Q9GZN8 174 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 XKR8Q9H6D3 395 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 UNKLQ9H9P5 680 aaKnown RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 CLK4Q9HAZ1 481 aaKnown RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PALMDQ9NP74 551 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 FBXO6Q9NRD1 293 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ATAD3AQ9NVI7 634 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 GTSE1Q9NYZ3 720 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PLA2G3Q9NZ20 509 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 GPR160Q9UJ42 338 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 MKLN1Q9UL63 735 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ARL5AQ9Y689 179 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 STON1Q9Y6Q2 735 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 C1orf232A0A0U1RR37 186 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 SULT1B1O43704 296 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 DNAJB6O75190 326 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PRKCGP05129 697 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 UGT2B4P06133 528 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 NCF1P14598 390 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 SLC1A2P43004 574 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 IRX4P78413 519 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 XIAPP98170 497 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 RPA4Q13156 261 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ATP1A4Q13733 1029 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF776Q68DI1 518 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF470Q6ECI4 717 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 ZNF852Q6ZMS4 543 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 PPP1R32Q7Z5V6 425 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 TUSC5Q8IXB3 177 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 OR2T3Q8NH03 318 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 VPS35Q96QK1 796 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 TBC1D10AQ9BXI6 508 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 CLPBQ9H078 707 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 GPR35Q9HC97 309 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 SYTL2Q9HCH5 934 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 MRPL40Q9NQ50 206 aaKnown RBP6.81□□□□□ -1.32
CLCN3-206ENST00000507875 SLC35D1Q9NTN3 355 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 STOML1Q9UBI4 398 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 SLC2A6Q9UGQ3 507 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 RAPGEFL1Q9UHV5 662 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 TLK1Q9UKI8 766 aa6.81□□□□□ -1.32
CLCN3-206ENST00000507875 BPTFQ12830 3046 aa6.8□□□□□ -1.32
CLCN3-206ENST00000507875 GLYATL1P3A0A0U1RQE8 302 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms