RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 FLRT3Q9NZU0 649 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 ACTR3BQ9P1U1 418 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 KCNN3Q9UGI6 736 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 IL36AQ9UHA7 158 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 MAN1B1Q9UKM7 699 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 NCKAP1Q9Y2A7 1128 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 NSG2Q9Y328 171 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 USP16Q9Y5T5 823 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 NRXN2Q9P2S2 1712 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 UBR2Q8IWV8 1755 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CNTNAP1P78357 1384 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 CEMIPQ8WUJ3 1361 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ANKRD31Q8N7Z5 1873 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 TRBV5-5A0A0J9YX44 114 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 DENND3A2RUS2 1198 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ANTXRLA6NF34 631 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ARHGAP42A6NI28 874 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 TLR4O00206 839 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 EPHB6O15197 1021 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 PSMD3O43242 534 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 GLRA3O75311 464 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ATP6V1G1O75348 118 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 DFFBO76075 338 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 MT-ATP6P00846 226 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 RAF1P04049 648 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ATP1A1P05023 1023 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 T-ENOLP0DO92 83 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 IGHV4-38-2P0DP08 117 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 AREGP15514 252 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ARF4P18085 180 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 UGT1A6P19224 532 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 NR1D1P20393 614 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 HMGB2P26583 209 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 SFNP31947 248 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 HPDP32754 393 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 HUNKP57058 714 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 POLR2FP61218 127 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 IRX4P78413 519 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 HTD2P86397 168 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZXDBP98169 803 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 PPP1R8Q12972 351 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 SQLEQ14534 574 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ACCSLQ4AC99 568 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 TECRLQ5HYJ1 363 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 C9orf57Q5W0N0 161 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 CAPRIN2Q6IMN6 1127 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 SPSB3Q6PJ21 355 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 CPEB2Q7Z5Q1 589 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ISCA2Q86U28 154 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 NLRP14Q86W24 1093 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 TDHQ8IZJ6 230 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF444Q8N0Y2 327 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 KDM8Q8N371 416 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 TMEM99Q8N816 258 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 GBP7Q8N8V2 638 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 LRTM2Q8N967 370 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF383Q8NA42 475 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 SMYD1Q8NB12 490 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 SIDT2Q8NBJ9 832 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 OR4C15Q8NGM1 316 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 SLCO4A1Q96BD0 722 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 DTD2Q96FN9 168 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 THOC3Q96J01 351 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 LYZL4Q96KX0 146 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 C4orf45Q96LM5 186 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 C16orf45Q96MC5 204 aaPredicted RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 NSMCE2Q96MF7 247 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 GUCD1Q96NT3 240 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 MEIS3Q99687 375 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 NYXQ9GZU5 481 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 C5orf66Q9H5L9 145 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 BICC1Q9H694 974 aaKnown RBP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZDHHC6Q9H6R6 413 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 EXOC1Q9NV70 894 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 SPASTQ9UBP0 616 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 GRID1Q9ULK0 1009 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 NIP7Q9Y221 180 aaKnown RBP eCLIP2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 TMED7Q9Y3B3 224 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 SCN11AQ9UI33 1791 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 DLEC1Q9Y238 1755 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 ARFGEF1Q9Y6D6 1849 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 UBN2Q6ZU65 1347 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 CLSPNQ9HAW4 1339 aa2.91□□□□□ -1.94
TRAPPC11-205ENST00000506426 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 CFAP73A6NFT4 308 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC15A5A6NIM6 579 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 H3BMM5 538 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SLC28A1O00337 649 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 RASGRF2O14827 1237 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 MAGEB2O15479 319 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SMAD6O43541 496 aaKnown RBP2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 SSX5O60225 188 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 GMNNO75496 209 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 CLN5O75503 358 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 CDK2AP2O75956 126 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 TRIM16O95361 564 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 CXCL14O95715 111 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 ATP1B1P05026 303 aa2.9□□□□□ -1.95
TRAPPC11-205ENST00000506426 EDN1P05305 212 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms